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. 2022 Jan 30;25(3):103821. doi: 10.1016/j.isci.2022.103821

Table 1.

Synthetic view on the potential of microbial inoculants to steer biogeochemical processes in agroecosystems to tackle climate change (CC) challenges

Type of inoculant Object Effect Modified function(s) Service regarding climate change (CC) Demonstration of effectiveness Examples of ref
N2O-reducing bacteria Soil Increased N2O reduction(A) Decreased soil N2O emissions CC mitigation through reduced GHG emissions In soil microcosms and the field: N2O emissions diminished by 28%–189% (Akiyama et al., 2016; Domeignoz-Horta et al., 2016)
Methanotrophs Soil Increased biological CH4 oxidation(A) Decreased soil CH4 emissions and removal of CH4 from the atmosphere CC mitigation through reduced GHG emissions In paddy field: CH4 emissions diminished by 6.9%–12% (Rani et al., 2021)
(Engineered) CO2-fixing microorganisms Soil Promoted microbial CO2 sequestration(A) Reduced soil CO2 emissions CC mitigation through reduced GHG emissions In culture medium: the CO2 fixation rates achieved were comparable to the capacity of the autotrophic microbes (Gong et al., 2015)
Microorganisms producing EPS-like compounds Soil The input of organic compounds like extracellular polymeric (EPS) substances into the soil(A) Better soil aggregates formation and water-holding capacity Better crop adaptation to drought/salinity and CC mitigation via better carbon (C) sequestration In planted soil pots: dry matter yield of roots and shoots increased by 149%–527 and 85%–281% under drought stress (Ashraf et al., 2004; Sandhya and Ali, 2015)
Plant Growth Promoting Rhizobacteria (PGPR) - general Plant Stimulated root growth and development(B) Better water uptake by roots from deep soil layers and enhanced physiological traits of seedlings Better crop adaptation to drought/salinity In planted soil pots and the field: plant biomass increased vary from 11% to 87% (Chandra et al., 2019; Silambarasan et al., 2019; Zhang et al., 2020)
PGPR - general Plant Increased whole plant biomass production(B) Better plant carbon sequestration CC mitigation via better carbon sequestration (if plant C is well managed) In planted soil pots: plant growth and plant-derived C inputs to soil increased by an average of 42 and 91% under elevated CO2 (Nie et al., 2015)
PGPR producing VOCs Plant Production of volatile organic compounds (VOCs)(B) Better germination, higher plant activities of antioxidant defense enzymes Better crop adaptation to drought/salinity In planted soil pots: plant phytohormones increased by 49%–255%; the activities of antioxidant defense enzymes increased by 9%–70% (Yasmin et al., 2020)
PGPR producing IAA Plant Production of phytohormone indole acetic acid (IAA)(B) Adjustment of the timing of plant flowering Better crop adaptation to CC via modulation of plant phenology In planted soil pots: plant flowering time delayed by ∼3 days (Lu et al., 2018)
Plant-nodulating rhizobia influencing interactions within the rhizosphere microbiome Plant Reshaped community interaction networks (though the same composition)(C) Modified interactions between microbial populations change their ability to express the genes required to help plants tolerate stresses Better crop adaptation to drought/salinity In planted soil pots: the salt stress-induced loss of plant shoot weight diminished by 50% (Benidire et al., 2020)
PGPR Azospirillum lipoferum Plant Increased nitrite reducer abundance (up to 60–90%) but only moderately increased abundances of N2O-reducers in sites with high C limitation; decreased nirS-denitrifier abundance (0 to -20%) and N2O reducer abundance (down to -20%) in sites with low C limitation(C) Increased gross (up to +113%) and net (+37%) N2O production in sites with high C limitation; decreased gross and net N2O productions (-15 and -40%, respectively) in sites with low C limitation Modification of CC mitigation through GHG emissions (on soils with a high C content, GHG emissions at the regional level can be increased by 2–5%) In planted soil mesocosms and the field: variable outcomes in situ, from -6% to +25% (Bounaffaa et al., 2018; Florio et al., 2017, 2019)

We distinguish the effect directly linked to the inoculant (A) and cascading effect through plants (B) or native soil community (C).