Biological Samples
|
Electroplaque tissue from Torpedo californica
|
EastCoast Bio |
Cat#DZ800 |
Chemicals, Peptides
|
2-[(4-aminobutanoyl)amino]-N,N,N-trimethylethanaminium (ATM) |
This paper |
N/A |
N-ethylmaleimide (NEM) |
Sigma |
Cat#E3876 |
cOmplete Mini |
Sigma |
Cat#11836153001 |
Ethylenediaminetetraacetic acid (EDTA) |
Sigma |
Cat#E9884 |
Sucrose |
Sigma |
Cat#S0389 |
Triton X-100 |
Acros |
Cat#327371000 |
n-Dodecyl-β-D-Maltopyranoside (DDM) |
Anatrace |
Cat#D310 |
2-Mercaptoethanol (βME) |
Sigma |
Cat#M6250 |
Soy extract polar lipids |
Avanti |
Cat#541602 |
Fos-choline-8, fluorinated |
Anatrace |
Cat#F300F |
α-Bungarotoxin |
Tocris |
Cat#2133 |
Critical Commercial Assays
|
NHS-activated Sepharose 4 Fast Flow |
GE Healthcare |
Cat#17–0906-01 |
Superose 6 Increase 10/300 GL |
GE Healthcare |
Cat#29–0915-96 |
Deposited Data
|
Coordinates of Torpedo nicotinic receptor in complex with α-bungarotoxin |
This paper |
PDB: 6UWZ |
Cryo-EM map of Torpedo nicotinic receptor in complex with α-bungarotoxin |
This paper |
EMDB: EMD-20928 |
Software and Algorithms
|
Serial EM |
Mastronarde, 2005 |
http://bio3d.colorado.edu/SerialEM/
|
MotionCor2 |
Zheng et al., 2017
|
https://emcore.ucsf.edu/cryoem-software
|
GCTF |
Zhang, 2016
|
https://www.mrc-lmb.cam.ac.uk/kzhang/Gctf/
|
Relion 3.0 |
Zivanov et al., 2018
|
https://www3.mrc-lmb.cam.ac.uk/relion/
|
Swissmodel |
Schwede et al., 2003
|
https://www.swissmodel.expasy.org/
|
UCSF Chimera |
Petterson et al., 2004 |
https://www.cgl.ucsf.edu/chimera/
|
Coot |
Emsley et al., 2010
|
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
|
Phenix |
Afonine et al., 2018
|
https://www.phenix-online.org/
|
Pymol |
Schrodinger, LLC |
http://www.pymol.org/
|
HOLE |
Smart et al., 1996
|
http://www.holeprogram.org/
|
pClamp 10 |
Molecular Devices |
https://www.moleculardevices.com/products/axon-patch-clamp-system/acquisition-and-analysis-software/pclamp-software-suite
|
Prism 8 |
GraphPad |
https://www.graphpad.com/scientific-software/prism/
|
Others
|
|
|
Quantifoil R1.2/1.3 Au 300 mesh |
Electron Microscopy Sciences |
Cat#Q3100AR1.3 |