Table 3.
Differentially expressed lncRNAs discovered in the porcine luteal cells treated with chemerin during the mid-luteal phase of the oestrous cycle.
| Transcript ID | Reference Gene ID | log2(FC) | q-Value | Regulation | Chr | Str | Start–End |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000076362 | ENSSSCG00000047565 | 2.17 | 1.39 × 10−3 | up | 18 | − | 42,660,099–42,669,101 |
| CL.2666.1 | N/A | 1.49 | 2.03 × 10−4 | up | 12 | + | 40,817,836–40,834,552 |
| CL.2666.5 | N/A | 1.49 | 2.03 × 10−4 | up | 12 | + | 40,817,901–40,850,478 |
| ENSSSCT00000090963 | ENSSSCG00000050550 | 1.48 | 2.85 × 10−6 | up | 11 | + | 19,098,312–19,102,389 |
| ENSSSCT00000066632 | ENSSSCG00000042788 | 1.11 | 1.92 × 10−2 | up | 5 | − | 5,752,685–5,756,310 |
| ENSSSCT00000068213 | ENSSSCG00000042788 | 1.11 | 1.92 × 10−2 | up | 5 | − | 5,752,686–5,770,732 |
| ENSSSCT00000028661 | ENSSSCG00000028322 | 0.67 | 1.08 × 10−4 | up | 9 | + | 64,031,854–64,037,769 |
| ENSSSCT00000068487 | ENSSSCG00000050423 | 0.54 | 1.69 × 10−4 | up | 13 | + | 21,429,679–21,433,475 |
| CL.12742.3 | ENSSSCG00000036505 | −0.58 | 2.29 × 10−5 | down | 6 | + | 144,782,442–144,918,548 |
| ENSSSCT00000038686 | ENSSSCG00000036505 | −0.58 | 2.29 × 10−5 | down | 6 | + | 144,782,503–144,918,549 |
| ENSSSCT00000046229 | ENSSSCG00000036505 | −0.58 | 2.29 × 10−5 | down | 6 | + | 144,782,552–144,918,549 |
| ENSSSCT00000047711 | ENSSSCG00000036505 | −0.58 | 2.29 × 10−5 | down | 6 | + | 144,782,576–144,918,548 |
| ENSSSCT00000076188 | ENSSSCG00000036505 | −0.58 | 2.29 × 10−5 | down | 6 | + | 144,823,167–144,918,548 |
| ENSSSCT00000087136 | ENSSSCG00000036505 | −0.58 | 2.29 × 10−5 | down | 6 | + | 144,781,500–144,912,714 |
| CL.9638.3 | N/A | −0.71 | 8.77 × 10−4 | down | 4 | − | 8,075,901–8,081,556 |
| ENSSSCT00000036447 | ENSSSCG00000006581 | −0.71 | 7.46 × 10−3 | down | 4 | + | 96,035,969–96,037,483 |
| ENSSSCT00000086415 | ENSSSCG00000048436 | −0.85 | 4.04 × 10−2 | down | 12 | − | 20,101,333–20,108,070 |
| ENSSSCT00000077934 | ENSSSCG00000050649 | −0.99 | 2.82 × 10−4 | down | 2 | − | 1,381,838–1,383,221 |
| ENSSSCT00000078829 | ENSSSCG00000050649 | −0.99 | 2.82 × 10−4 | down | 2 | − | 1,381,841–1,384,446 |
| ENSSSCT00000081255 | ENSSSCG00000050649 | −0.99 | 2.82 × 10−4 | down | 2 | − | 1,381,839–1,383,160 |
| ENSSSCT00000084501 | ENSSSCG00000050649 | −0.99 | 2.82 × 10−4 | down | 2 | − | 1,381,841–1,384,446 |
| ENSSSCT00000072909 | ENSSSCG00000048033 | −1.82 | 7.70 × 10−4 | down | 3 | − | 112,308,405–112,318,405 |
| ENSSSCT00000075362 | ENSSSCG00000048033 | −1.82 | 7.70 × 10−4 | down | 3 | − | 112,308,405–112,318,340 |
| ENSSSCT00000080610 | ENSSSCG00000048033 | −1.82 | 7.70 × 10−4 | down | 3 | − | 112,308,405–112,318,450 |
Abbreviations: Chr—chromosome number, CL—Stringtie’s gene identifier, log2(FC)—logarithm to base 2 of fold change, N/A—not available, Str—strand, ‘+’—sense strand, ‘−’—antisense strand.