Figure 5.

Co-expression networks of top genes in in vivo and in vitro dataset

(A) Sharing of top genes across in vivo/in vitro datasets.

(B and D) The co-expression network and the co-expression matrix of the top 30 genes in the in vivo dataset.

(C and E) The co-expression network and co-expression matrix of the top 30 genes in the in vitro dataset. We retained all co-expression relationships with an absolute correlation value >0.4 in the plot. The five most important genes in either in vivo or in vitro dataset were marked as red (except PF3D4_1038700, which was not shown in (C), as there were no other genes that shared significant correlation (|r| > 0.4) with this gene).