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. 2022 Feb 11;9:758464. doi: 10.3389/fmed.2022.758464

Table 3.

Depth of coverage by plasma NGS and detection of EGFR mutation and mutation allele frequency (AF %).

Tissue EGFR test Plasma NGS test
Case EGFR Mutation Method Average consensus coverage (X) EGFR Mutation (HGVSp) AF (%)
1 Exon19del Sanger 9496.7 p.E746_A750del 0.33
2 Exon19del Roche PCR 4830.58 p.E746_A750del 9.44
3 Exon19del Roche PCR 14854.77 p.E746_A750del 7.15
4 Exon19del Sanger 11864.58 p.E746_S752delinsV 50.7
5 Exon19del Roche PCR 6524.41 - ND
6 p.E746_T751delinsA Sanger 12254.13 p.E746_T751delinsA 80.3
7 p.L858R Roche PCR 13842.24 p.L858R 1.51
8 Exon19del Sanger 8068.15 - ND
9 p.L858R Sanger 14565.16 - ND
p.E709K - ND
10 p.L747_A750delinsP Sanger 7420.09 p.L747_A750delinsP 0.98
11 p.L858R Roche PCR 10417.81 p.L858R 0.86
p.S768I p.S768I 0.25
12 Exon19del unspecified Roche PCR 5722.85 p.E746_A750del 0.73

ND, not detected.