Table 2.
ID FMUL | MLST | Hypermucoviscosity Phenotype |
Resistance Profile | Virulence Profile | K Locus | O Locus |
OmpK Mutations | Plasmid Replicons | |||
---|---|---|---|---|---|---|---|---|---|---|---|
Carbapenemases | β-Lactamases | Other Resistance Genes | Yersiniabactin | Colibactin | |||||||
5 | 231 | no | KPC-3 | OXA-9 | aac(3)-IId;aadA;aadA16;strA;strB; catII.2; arr-3; sul1;sul2; tet(D); dfrA1;dfrA14*;dfrA27; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL51 | O1v2 | - | ColKP3; IncFIA(HI1); IncFIB(K)(pCAV1099-114); IncR; IncX3 |
17 | 348 | no | KPC-3; OXA-181 | OXA-9; TEM-1D; SHV-11 |
aac(6′)-Ib’;strA;strB; qnrB1;qnrS1;
sul2; dfrA14 |
ybt unknown | - | KL62 | O1v1 | OmpK36-0% | ColKP3; IncFIA(HI1); IncFIB(K)(pCAV1099-114); IncFII(K); IncR; IncX3 |
20 | 147 | no | OXA-181 | TEM-1D; CTX-M-15; SHV-1 | aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; arr-3; sul1;sul2; dfrA27; GyrA-83I;ParC-80I | ybt 16; ICEKp12 | - | KL64 | O2v1 | - | FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K) |
22 | 13 | no | KPC-3 | OXA-9; TEM-1D; SHV-1 | aac(6′)-Ib’;aadA;strA;strB; sul2; dfrA14 | ybt 17; ICEKp10 | clb 3 | KL3 | O1v2 | - | ColKP3; IncFIA(HI1); IncFIB(K)(pCAV1099-114); IncR; IncX3 |
24 | 17 | no | OXA-181 | OXA-1; CTX-M-15; SHV-11 |
aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strB; qnrB4;qnrS1; catII.2; arr-3; sul1;sul2; dfrA27 | - | - | KL25 | O5 | - | ColRNAI; FIA(pBK30683); FII(pBK30683) |
26 | 147 | no | OXA-181 | TEM-1D; CTX-M-15 | aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; arr-3; sul1;sul2; dfrA27; GyrA-83I;ParC-80I | ybt 16; ICEKp12 | - | KL64 | O2v1 | - | ColRNAI; FIA(pBK30683); FII(pBK30683) |
27 | 17 | no | OXA-181 | TEM-1D; CTX-M-15; SHV-1 | aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; arr-3; sul1;sul2; tet(D); dfrA14;dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColRNAI; FIA(pBK30683); FII(pBK30683) |
43 | 17 | no | OXA-181 | SHV-11 | aac(6′)-Ib-cr;aadA16;strA;strB; catII.2; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColKP3, IncFIA(HI1), IncFIB(K)(pCAV1099-114), IncM1, IncR, IncX3 |
45 | 17 | no | OXA-181 | TEM-1D; CTX-M-15; SHV-11 |
aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strB; qnrS1; mphA; catII.2; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | IncFIB(K); IncFIB(pKPHS1); IncFII(K); IncX3 |
48 | 17 | no | OXA-181 | SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strB; qnrS1; catII.2; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColRNAI; FIA(pBK30683); FII(pBK30683) |
60 | 34 | no | KPC-3 | TEM-1D; SHV-26 | strA;strB; sul2; dfrA14 | - | - | KL153 | O1v2 | - | IncFIB(K); IncFIB(pQil); IncFII(K); IncX3 |
71 | 17 | no | OXA-181 | OXA-1; TEM-1D; CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strB; qnrS1; mphA; catII.2; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | IncC; IncFIB(K)(pCAV1099-114); IncFII(K) |
81 | 37 | no | KPC-3 | OXA-9; TEM-1D; SHV-11 | aac(6′)-Ib’;aadA;strA;strB; sul2; dfrA14 | ybt 10; ICEKp4 | - | KL14 | O3b | - | IncFIB(K); IncFII(K) |
92 | 13 | yes | KPC-3 | OXA-9; TEM-1D; SHV-1 | aac(6′)-Ib’;aadA;strA;strB; sul2; dfrA14; GyrA-87N | ybt 17; ICEKp10 | clb 3 | KL3 | O1v2 | OmpK35-70% | Col440I; Col440II; FIA(pBK30683); FII(pBK30683); IncFIA(HI1); IncFIB(K); IncR |
99 | 13 | yes | KPC-3 | OXA-9; TEM-1D; SHV-1 | aac(6′)-Ib’;aadA;strA;strB; sul2; dfrA14; GyrA-87N | ybt 17; ICEKp10 | clb 3 | KL3 | O1v2 | OmpK35-70% | ColRNAI; FII(pBK30683); IncFIB(K); IncFII(K) |
101 | 323 | no | KPC-3 | OXA-1; OXA-9; TEM-1D; SHV-1 |
aac(3)-IIa;aadA;strA;strB; qnrB1; sul2; tet(A); dfrA14; GyrA-83F | - | - | KL21 | O3b | - | FIA(pBK30683), FII(pBK30683), IncFIB(K), IncFII(K) |
102 | 392 | no | - | OXA-1; TEM-1D; CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; tet(A); dfrA14; GyrA-83I;ParC-80I | - | - | KL27 | O4 |
OmpK35-58%;
OmpK36-0% |
IncFIB(K), IncFII(K) |
116 | 147 | no | OXA-181 | TEM-1D; CTX-M-15; SHV-1 | aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; arr-3; sul1;sul2; dfrA27; GyrA-83I;ParC-80I | ybt 16; ICEKp12 | - | KL64 | O2v1 | - | IncFIA(HI1); IncFIB(K); IncR |
122 | 13 | yes | KPC-3 | OXA-9; TEM-1D; SHV-1 | aac(6′)-Ib’;aadA;strA;strB; sul2; dfrA14; GyrA-87N | ybt 17; ICEKp10 | clb 3 | KL3 | O1v2 | OmpK35-70% | IncFIA(HI1); IncFIB(K); IncR |
127 | 29 | yes | OXA-181 | - | qnrS1; tet(D) | ybt 10; ICEKp4 | - | KL54 | O1v2 | - | IncFIA(HI1); IncFIB(K); IncR |
132 | 37 | no | KPC-3 | OXA-9; TEM-1D; SHV-11 | aac(6′)-Ib’;aadA;strA;strB; sul2; dfrA14 | ybt 10; ICEKp4 | - | KL14 | O3b | - | ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K); IncR |
181 | 13 | no | KPC-3 | OXA-9; TEM-1D; CTX-M-15; SHV-1 | aac(6′)-Ib’; aadA; aadA5; strA;strB; qnrS1; mphA; sul1;sul2; tet(D); dfrA14;dfrA17 | ybt 9; ICEKp3 | - | KL3 | O1v2 | - | IncFIB(K); IncFII(K) |
184 | 348 | no | KPC-3 | OXA-9; TEM-1D; SHV-11 | strA;strB; qnrB1; sul2; dfrA14 | ybt unknown | - | unknown | O1v1 | - | Col(pHAD28); FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K); IncFII(K); IncX3 |
224 | 39 | no | NDM-1 | OXA-1; OXA-10; TEM-1D; CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA;aph3-Ia;armA;strA;strB; qnrB1;qnrS1; mphE;msrE; catII.2;cmlA5; arr-2; sul2; tet(A); dfrA14;dfrA7 | ybt 15; ICEKp11 | - | KL62 | O1v2 | - | IncFIA(HI1); IncFIB(K); IncL; IncR |
233 | 307 | yes | - | OXA-1; TEM-1D; CTX-M-15; SHV-28 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; tet(A); dfrA14; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL102 | O2v2 | OmpK36-75% | FIA(pBK30683); FII(pBK30683); IncM1 |
245 | 307 | yes | KPC-3 | OXA-1; TEM-1D; CTX-M-15; SHV-28 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; tet(A); dfrA14*; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL102 | O2v2 | OmpK36-75% | Col(pHAD28); IncFIB(K); IncFIB(pKPHS1); IncFIB(pNDM-Mar); IncFII(Yp); IncL |
247 | 307 | yes | - | OXA-1; TEM-1D; CTX-M-15; SHV-28 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; tet(A); dfrA14; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL102 | O2v2 | OmpK36-75% | Col(pHAD28); IncFIB(K); IncFIB(pKPHS1); IncFIB(pNDM-Mar); IncFII(Yp); IncL |
248 | 13 | no | KPC-3 | TEM-1D; SHV-1 | strA;strB; catA4;floR; sul2; tet(D);tet(J); dfrA1;dfrA14 | ybt 17; ICEKp10 | clb 3 | KL19 | O1v2 | - | IncFIB(K); IncFIB(pKPHS1); IncFIB(pNDM-Mar); IncFII(Yp); IncL |
257 | 29 | no | GES-5 | BEL-1; SHV-187 | aac(6′)-Ib4 | ybt 17; ICEKp10 | clb 3 | KL30 | O1v2 | - | IncFIA(HI1); IncFIB(K); IncR; ColRNAI |
274 | 307 | yes | - | OXA-1; TEM-1D; CTX-M-15; SHV-28 | aac(3)-IIa^;aac(6′)-Ib-cr;strA^;strB; qnrB1^; sul2; tet(A); dfrA14; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL102 | O2v2 | OmpK36-75% | FII(pBK30683); IncFIB(K); IncFII(K); IncR |
296 | 147 | no | OXA-181 | TEM-1D; CTX-M-15 | aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; arr-3; sul1;sul2; dfrA27; GyrA-83I;ParC-80I | ybt 16; ICEKp12 | - | KL64 | O2v1 | - | IncFIB(K), IncFIB(pKPHS1), IncFII(K), IncX3 |
345 | 5840 | no | KPC-3 | OXA-9; TEM-1D; SHV-1 | aac(6′)-Ib’;aadA;strA;strB; sul2; dfrA14 | ybt 10; ICEKp4 | - | KL5 | O3b | - | ColKP3; ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K); IncR; IncX3 |
363 | 3031 | yes | - | SHV-1 | - | ybt 10; ICEKp4 | - | KL24 | O2v1 | - | IncFIB(K) |
443 | 17 | no | OXA-181 | OXA-1; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColKP3; IncFIA(HI1); IncFIB(K) (pCAV1099-114); IncFII(K); IncR; IncX3 |
447 | 231 | no | - | OXA-1; TEM-1D; CTX-M-15; SHV-1 | aac(3)-IIa;aac(6′)-Ib-cr;aadA2;aph3-Ia;strA;strB; qnrB1; mphA; sul1;sul2; dfrA12;dfrA14; GyrA-83I;ParC-80I | ybt 10; ICEKp4 | - | KL51 | O1v2 | - | ColKP3; ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K); IncR; IncX3 |
449 | 13 | no | KPC-3; OXA-181 | TEM-1D; SHV-1 | strA;strB; qnrS1; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | KL19 | O1v2 | - | IncFIB(K); IncFIB(pKPHS1); IncFII(K); IncR; IncX3 |
451 | 17 | no | OXA-181 | OXA-1; TEM-1D; CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; mphA; arr-3; sul1; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColKP3; IncFIA(HI1); IncFIB(K)(pCAV1099-114); IncR; IncX3 |
460 | 13 | yes | KPC-3; OXA-181 | TEM-1D; SHV-1 | strA;strB; qnrS1; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | KL19 | O1v2 | - | IncFIA(HI1); IncFIB(K); IncR |
462 | 17 | no | OXA-181 | OXA-1; TEM-1D; CTX-M-15 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;aadA;strA;strB; qnrS1; mphA; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFIB(pKPHS1); IncFII(K); IncR; |
463 | 17 | no | OXA-181 | OXA-1; TEM-1D; CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strB; qnrS1; mphA; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | IncFIB(K); IncFIB(pKPHS1); IncFII(K); IncR |
465 | 17 | no | OXA-181 | OXA-1; TEM-1D;CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strB; qnrS1; mphA; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColKP3; IncFIA(HI1); IncFIB(K)(pCAV1099-114); IncFII(K); IncR; IncX3 |
467 | 45 | no | KPC-3 | TEM-1D; SHV-1 | strA;strB; sul2; tet(D); dfrA14 | ybt 10; ICEKp4 | - | KL62 | O2v1 | - | IncFIB(K); IncFIB(pKPHS1); IncFII(K); IncX3 |
470 | 45 | no | - | OXA-1; TEM-1D; CTX-M-15; SHV-1 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; dfrA14 | ybt 10; ICEKp4 | - | KL62 | O2v1 | - | ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K) |
471 | 17 | no | OXA-181 | TEM-1; CTX-M-15; SHV-11 |
aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; mphA; arr-3; sul1; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K) |
473 | 45 | no | OXA-181 | OXA-1; TEM-1D;CTX-M-15; SHV-1 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1;qnrS1; sul2; tet(D); dfrA14 | ybt 10; ICEKp4 | - | KL62 | O2v1 | - | ColKP3; ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K); IncR; IncX3 |
476 | 17 | no | OXA-181 | OXA-1; TEM-1D; CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; mphA; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | IncFIB(K); IncFII(K) |
498 | 13 | yes | KPC-3; OXA-181 | TEM-1D; SHV-1 | strA;strB; qnrS1; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | KL19 | O1v2 | - | IncFIB(K); IncFII |
499 | 307 | no | - | OXA-1; TEM-1D; CTX-M-15; SHV-28 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; tet(A); dfrA14; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL102 | O2v2 | OmpK35-30% | ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K); IncR |
500 | 307 | no | - | OXA-1; TEM-1D; CTX-M-15; SHV-28 | aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; tet(A); dfrA14; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL102 | O2v2 | OmpK35-30% | ColKP3; IncFIA(HI1); IncFIB(K) (pCAV1099-114); IncR; IncX3 |
501 | 3031 | no | - | CTX-M-15 | aadA5; qnrS1; mphA; sul1; dfrA17 | ybt 10; ICEKp4 | - | KL24 | O2v1 | OmpK36-85% | Col156; ColKP3; IncFIA(HI1); IncFIB(AP001918); IncFIB(K)(pCAV1099-114); IncFII; IncR; IncX3 |
502 | 147 | no | OXA-181 | TEM-1D; CTX-M-15 | aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL64 | O2v1 | - | IncFIB(K)(pCAV1099-114); IncFIB(pQil); IncFII(K) |
516 | 13 | no | KPC-3 | TEM-1D^ | strA;strB; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | - | O1/O2v2 | - | Col440II; ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K) |
517 | 13 | no | KPC-3 | TEM-1D; SHV-1 | strA;strB; sul2; tet(D); dfrA14 | - | - | - | O1/O2v2 | - | IncFIB(K)(pCAV1099-114); IncFIB(pQil); IncFII(K) |
522 | 661 | no | - | OXA-10; TEM-1D; SHV-27 | aac(6′)-Ib;aadA;aadA2;strA;strB; qnrS1; mphA; sul1;sul2; tet(A); dfrA12;dfrA14 | ybt 14; ICEKp5 | - | KL27 | O2v2 | - | ColKP3; ColRNAI; FIA(pBK30683); FII(pBK30683); IncFIB(K); IncFII(K); IncR; IncX3 |
523 | 13 | no | KPC-3 | TEM-1D | strA^;strB; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | - | O1v2 | - | IncFIB(K); IncFII(K) |
533 | 661 | no | - | OXA-10; TEM-1D; SHV-27 | aac(6′)-Ib’;aadA;aadA2;strA;str; qnrS1; mphA; sul1;sul2; tet(A); dfrA12;dfrA14 | ybt 14; ICEKp5? | - | KL27 | O2v2 | - | IncFIB(K); IncFIB(pKPHS1); IncFII(K); IncN |
535 | 13 | no | KPC-3; OXA-181 | TEM-1D; SHV-1 | strA;strB; qnrS1; sul2; tet(D); dfrA14* | ybt 17; ICEKp10 | clb 3 | - | O1v2 | - | Col440I; FIA(pBK30683); FII(pBK30683); IncFII(pCoo); IncN |
548 | 307 | no | - | OXA-1; TEM-1; CTX-M-15; SHV-28 |
aac(3)-IIa;aac(6′)-Ib-cr;strA;strB; qnrB1; sul2; tet(A); dfrA14 | ybt 9; ICEKp3 | - | KL102 | O2v2 | - | Col156; IncFIB(AP001918); IncFIB(pKPHS1); IncFII; IncN |
584 | 17 | no | OXA-181 | OXA-1; CTX-M-15; SHV-11 |
aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strA;strB; qnrS1; mphA; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | FIA(pBK30683); FII(pBK30683) |
592 | 17 | no | OXA-181 | TEM-1D; CTX-M-15; SHV-11 | aac(3)-IIa;aac(6′)-Ib-cr;aadA16;strB; qnrS1; mphA; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL25 | O5 | - | Col440I; FIA(pBK30683); FII(pBK30683); IncR |
595 | 485 | no | KPC-3 | TEM-1D; SHV-1 | aadA;strA^;strB; sul2; dfrA14 | ybt 10; ICEKp4 | - | - | OL101 | - | Col440II; FIA(pBK30683); FII(pBK30683); IncFIB(K)(pCAV1099-114) |
596 | 147 | no | OXA-181 | TEM-1D; CTX-M-15-; SHV-1 | aac(6′)-Ib-cr;aadA16;strA^;strB; qnrS1; arr-3; sul1;sul2; dfrA27 | ybt 16; ICEKp12 | - | KL64 | O2v1 | - | IncFIB(K); IncFII(K) |
648 | 13 | no | KPC-3; OXA-48 | TEM-1D; SHV-1 | strA^;strB; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | KL19 | O1v2 | - | ColRNAI, FIA(pBK30683), FII(pBK30683), IncFIB(K), IncL |
679 | 307 | no | - | SHV-28 | GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL102 | O2v2 | - | - |
680 | 231 | no | KPC-3 | - | aac(6′)-Ib; dfrA14; GyrA-83I;ParC-80I | ybt 9; ICEKp3 | - | KL51 | O1/O2v2 | - | Col440I, Col440II, FIA(pBK30683), FII(pBK30683), IncFIB(K), IncFII(K), IncR |
681 | 13 | no | KPC-3 | TEM-1D | strA;strB; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | KL19 | O1v2 | - | ColRNAI, FIA(pBK30683), FII(pBK30683), IncFIB(K) |
683 | 13 | no | KPC-3 | TEM-1D; SHV-1 | strA;strB; sul2; dfrA14; GyrA-87N | ybt 17; ICEKp10 | clb 3 | KL3 | O1v2 | - | ColRNAI, FIA(pBK30683), FII(pBK30683) |
685 | 13 | no | KPC-3 | TEM-1D; SHV-1 | strA;strB; sul2; tet(D); dfrA14 | ybt 17; ICEKp10 | clb 3 | KL19 | O1v2 | - | ColRNAI, FIA(pBK30683), FII(pBK30683), IncFIB(K) |