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. 2022 Feb 15;23(4):2141. doi: 10.3390/ijms23042141

Table 3.

Performances with angles using two DeepSnap systems of the four MIE targets.

PubChem 720725_GR_Ant 1347030_TRHR_Ago 1347032_TGF_Beta_Python
Assay AID Python DIGITS Python DIGITS Python DIGITS
ROC_AUC average 0.832 ± 0.048 0.856 ± 0.029 0.875 ± 0.031 0.886 ± 0.028 0.879 ± 0.015 0.907 ± 0.020
max_ROC_AUC 0.926 0.910 0.915 0.918 0.911 0.932
max_angle 185 95 176 185 185 75
max_split 7:1:2 5:5:1 3:1:2 5:3:4 7:1:2 5:3:2
BAC average 0.762 ± 0.044 0.791 ± 0.023 0.811 ± 0.032 0.829 ± 0.023 0.805 ± 0.015 0.849 ± 0.030
max_BAC 0.864 0.837 0.868 0.876 0.844 0.930
max_angle 185 95 176 355 185 176
max_split 7:1:2 3:3:1 3:1:2 5:3:4 7:1:2 5:3:2
MCC average 0.248 ± 0.065 0.282 ± 0.030 0.141 ± 0.017 0.155 ± 0.022 0.309 ± 0.025 0.384 ± 0.044
max_MCC 0.451 0.354 0.194 0.208 0.373 0.478
max_angle 176 75 176 355 176 165
max_split 7:1:2 4:4:1 3:1:2 1:1:1 7:1:2 2:2:1
Acc average 0.790 ± 0.058 0.812 ± 0.044 0.781 ± 0.030 0.769 ± 0.060 0.770 ± 0.029 0.833 ± 0.033
max_Acc 0.917 0.939 0.856 0.902 0.834 0.896
max_angle 176 155 176 125 176 165
max_split 7:1:2 4:4:1 3:1:2 1:1:1 7:1:2 2:2:1
loss_val average 0.383 ± 0.115 0.108 ± 0.014 0.189 ± 0.070 0.032 ± 0.007 0.316 ± 0.061 0.113 ± 0.011
min_loss_train 0.110 0.065 0.194 0.024 0.197 0.087
min_angle 185 195 176 325 350 230
max_split 7:1:2 7:1:2 3:1:2 3:1:2 3:2:1 7:1:2
loss_train average 0.413 ± 0.153 0.247 ± 0.088 0.280 ± 0.120
min_loss_train 0.038 0.047 0.044
min_angle 176 176 176
max_split 2:2:1 1:1:1 1:1:1
PR_AUC average 0.335 ± 0.117 0.103 ± 0.041 0.315 ± 0.056
max_PR_AUC 0.660 0.194 0.453
max_angle 176 176 176
max_split 7:1:2 3:1:2 3:1:1
F average 0.853 ± 0.039 0.868 ± 0.020 0.833 ± 0.020
max_F 0.935 0.914 0.876
max_angle 176 176 176
max_split 7:1:2 3:1:2 7:1:2