Table 4.
PubChem | 720725_GR_Ant | 1347030_TRHR | 1347032_TGF_Beta | |
---|---|---|---|---|
Assay AID | Train:Valid:Test = 7:1:2 | Train:Valid:Test = 3:1:2 | Train:Valid:Test = 7:1:2 | |
ROC_AUC | average | 0.884 ± 0.053 | 0.897 ± 0.016 | 0.909 ± 0.011 |
max_ROC_AUC | 0.930 | 0.911 | 0.922 | |
max_LR | 0.00009 | 0.000002 | 0.000021 | |
BAC | average | 0.817 ± 0.053 | 0.844 ± 0.012 | 0.839 ± 0.010 |
max_BAC | 0.865 | 0.865 | 0.853 | |
max_LR | 0.0007 | 0.000001 | 0.000029 | |
MCC | average | 0.354 ± 0.090 | 0.171 ± 0.015 | 0.361 ± 0.016 |
max_MCC | 0.466 | 0.191 | 0.387 | |
max_LR | 0.00007 | 0.0048 | 0.000029 | |
Acc | average | 0.859 ± 0.060 | 0.811 ± 0.025 | 0.807 ± 0.028 |
max_Acc | 0.928 | 0.848 | 0.855 | |
max_LR | 0.00007 | 0.000005 | 0.00002 | |
loss_train | average | 0.215 ± 0.231 | 0.098 ± 0.062 | 0.125 ± 0.110 |
min_loss | 0.022 | 0.020 | 0.038 | |
min_LR | 0.00003 | 0.00002 | 0.00003 | |
loss_val | average | 0.263 ± 0.186 | 0.122 ± 0.058 | 0.236 ± 0.062 |
min_loss | 0.124 | 0.066 | 0.170 | |
min_LR | 0.00003 | 0.0008 | 0.000021 | |
PR_AUC | average | 0.502 ± 0.177 | 0.155 ± 0.045 | 0.410 ± 0.064 |
max_PR_AUC | 0.789 | 0.213 | 0.472 | |
max_LR | 0.00007 | 0.0042 | 0.00003 | |
F | average | 0.898 ± 0.039 | 0.886 ± 0.015 | 0.858 ± 0.019 |
max_F | 0.942 | 0.909 | 0.890 | |
max_LR | 0.00007 | 0.000005 | 0.00002 |