Table 3.
Secondary metabolite and antibiotic gene clusters in P. protegens FJKB0103 and related strains predicted by antiSMASH a.
| Strains | Total | DAPG | PLT | PRN | NRPS | Bacteriocin | Others |
|---|---|---|---|---|---|---|---|
| P. protegens FJKB0103 | 16 | 1 | 1 | 1 | 7 | 2 | 4 |
| P. protegens Cab57 | 14 | 1 | 1 | 1 | 5 | 2 | 4 |
| P. protegens CHA0 T | 14 | 1 | 1 | 1 | 5 | 3 | 3 |
| P. protegens H78 | 15 | 1 | 1 | 1 | 5 | 3 | 4 |
| P. protegens SN15-2 | 16 | 1 | 1 | 1 | 6 | 2 | 5 |
| P. protegens FDAARG | 15 | 1 | 1 | 1 | 5 | 3 | 4 |
| P. protegens Pf-5 | 15 | 1 | 1 | 1 | 5 | 3 | 4 |
| P. saponiphila DSM 9751 T | 14 | 1 | 0 | 0 | 4 | 3 | 6 |
| P. cerasi 58 T | 9 | 0 | 0 | 0 | 5 | 1 | 3 |
| P. meliae CFBP 3225 T | 9 | 0 | 0 | 0 | 5 | 0 | 4 |
| P. congelans DSM 14939 T | 9 | 0 | 0 | 0 | 7 | 0 | 2 |
| P. tremae ICMP9151 T | 15 | 0 | 0 | 0 | 9 | 0 | 6 |
| P. caspiana FBF102 T | 6 | 0 | 0 | 0 | 2 | 2 | 2 |
a Clusters identified by antiSMASH 5.0 using the “Extra Features” settings; Abbreviations are as follows: 2,4-diacetylphloroglucinol, DAPG; pyrrolnitrin, PRN; pyoluteorin, PLT; non-ribosomal peptide synthase, NRPS; T means type strain.