Table 1.
Statistics of A. niger CSR3 assembly and annotation.
| Assembly Features | |
|---|---|
| Number of Contigs | 23 |
| Total span (bp) | 35,891,468 |
| Longest scaffold (bp) | 7,549,885 |
| N50 | 2,490,974 |
| L50 | 5 |
| GC contents | 49.50 |
| Total number of genes | 12,442 |
| Total number of CDS | 12,442 |
| Number of exons | 39,605 |
| Total gene length | 21,532,949 |
| Total cds length | 17,796,224 |
| Total exon length | 19,305,210 |
| Longest gene | 21,415 |
| Longest cds | 21,201 |
| Longest exon | 13,734 |
| mean gene length | 1730 |
| mean cds length | 1430 |
| mean exon length | 487 |
| tRNA | 270 |
| rRNA | 57 |
N50 = the sequence length of the shortest contig at 50% of the total genome length.; L50 = count of smallest number of contigs whose length sum makes up half of genome size; CDS = (Coding Sequence).