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. 2022 Jan 26;14(2):247. doi: 10.3390/v14020247

Figure 3.

Figure 3

Maximum-likelihood phylogenetic tree based on the core genome alignment of Phytophthora pluvialis RNA virus 1 (PplRV1) sequences isolated from cluster NZ1 and NZ2 Phytophthora pluvialis isolates. The length of the core genome is 6512 nt, which was obtained by eight sequencing primer pairs (see Table S2 for details). Black color-coding viruses were isolated from cluster NZ2 P. pluvialis (PplRV1 genotype b). PplRV1_4018 is the reference for NZ2 P. pluvialis viruses. Orange color-coding viruses were isolated from cluster NZ1 P. pluvialis (PplRV1 genotype a). PplRV1_3052 is the reference for NZ1 P. pluvialis viruses. Numbers above the branches show bootstrap support in percentiles in 1000 replicates. Scale bar indicates substitutions per site.