Table 1.
Author | Countries Involved | Sample | Platform | Key Findings |
---|---|---|---|---|
Auckland et al., 2020 [93] | Fiji, India, UK | 822 cases; 1800 controls | HumanCore- 24 BeadChip (Illumina Inc., San Diego, CA, USA) UK Biobank Axiom Array (Affymetrix, USA) |
HLA class III PBX2 region rs201026476, chromosome 14 (OR 1.99, 95% CI 1.58–2.51, p = 7.45 × 10−9) reached GWS Independent association was maintained in HLA class III region after conditioning and results replicated by validating through UK dataset. |
Parks et al., 2017 [101] | Eight Oceanian countries | 1006 cases; 1846 controls | Low-density 300 k Illumina HumanCore platform | IGHV4-61 02 rs11846409 on chromosome 14 (1.4× risk) (OR 1.43, 95% CI 1.27–1.61, p = 4.1 × 10−9) that reached GWS |
Gray et al., 2017 [102] | Northern territory of Australia | 398 cases; 865 controls | HumanCore-24 Bead Chip (Illumina Inc., San Diego, CA, USA) | HLA-DQA1 rs9272622 on chromosome 6 (protective) (OR = 0.90, p = 1.86 × 10−7) did not reach GWS |
Machipisa et al., 2021 [103] | 8 African countries | 2548 cases; 2261 controls Family group -348 participants (118 trio families) |
Infinium Human Omni 2.5–8 (Illumina Inc., San Diego, CA, USA) | GWS association at 11q24.1 (rs1219406); (OR 1.65; 95%CI, 1.48– 1.82; p = 4.36 × 10−8) for black African individuals but not admixed African individuals or other external datasets Replicated rs11846409 IGH locus GWAS [101] in admixed African individuals |