Table 5.
Comparison of the results of clinical samples obtained with RITA-2 and by sequencing or subtyping with other RT-PCRs. Results for sample originating from Germany are shown in Table S2.
| Country | Species | No. of Farms | RITA-2 | Subtyping/ Other PCRs |
Sequencing |
|---|---|---|---|---|---|
| Egypt | Chicken | 2 | H5, N8 | H5, N8 | H5 HP, N8 [22] |
| Egypt | Turkey | 2 | H5, N8 | H5, N8 | H5 HP, N8 [22] |
| Egypt | Ducks | 1 | H5, N8 | H5, N8 | H5 HP, N8 |
| Egypt | Ducks | 7 | H5, N8 | H5, N8 | H5 HP |
| Egypt | Chicken | 3 | H9, N2 | H9, N2 | H9, N2 [22] |
| Egypt | Chicken | 2 | H5, N1 | H5, N1 | H5, N1 [22] |
| Egypt | Duck | 5 | H5, N8 | H5, N8 | H5 HP |
| Egypt | Chicken | 5 | H5, H9, N8, N2 | H5, H9, N2 | H5 HP [22] |
| Egypt | Chicken | 3 | H5, N2 | H5, N2 | H5 HP, N2 [22] |
| Egypt | Chicken | 2 | H5, H9, N8, N2 | H5, H9, N8, N2 | H5, H9, N8, N2 [10] |
| Egypt | Chicken | 1 | H5, H9, N8, N2, IBV, NDV | H5, H9, N8, N2, IBV, NDV | H5, H9, N8, N2, IBV [10] |
| Egypt | Chicken | 1 | H5, N8, IBV, NDV | H5, N8, IBV, NDV | H5, N8, IBV [10] |
| Bangladesh | Duck | 13 | H4, N6 | H4, N6 | H4, N6 [23] |