Table 5.
Antimicrobial resistance and virulence genes obtained by screening the genome of lytic phages using ABRicate.
| Phage Genome | Gene | Product | Resistance/Virulence | Database Source |
|---|---|---|---|---|
| Stx2 converting phage vB_EcoP_24B (NC_027984) | CatA1 | type A-1 chloramphenicol O-acetyltransferase | Chloramphenicol resistance | NCBI, CARD, ARGANNOT, resfinder, megares |
| iss2 | Increase serum survival protein | Virulence | ecoli_vf | |
| Enterobacteria phage lambda (NC_001416) | iss2 | Increase serum survival protein | Virulence | ecoli_vf |
| Phage cdtI (NC_009514) |
nleH1 | Type III secretion system effector NleH1 | Virulence | ecoli_vf |
| cif | Type III secretion system effector Cif cyclomodulin | Virulence | ecoli_vf | |
| cdtA | Cytolethal distending toxin subunit A | Virulence | ecoli_vf | |
| cdtB | Cytolethal distending toxin subunit B | Virulence | ecoli_vf | |
| cdtC | Cytolethal distending toxin subunit C | Virulence | ecoli_vf | |
| Enterobacteria phage YYZ-2008 (NC_011356) | stx1A | Shiga toxin 1 subunit A | Virulence | ecoli_vf |
| stx1B | Shiga-like toxin 1 subunit B | Virulence | ecoli_vf | |
| nleG6-3 | NleG Type 3 Effectors | Virulence | ecoli_vf | |
| nleG5-1 | NleG Type 1 Effectors | Virulence | ecoli_vf | |
| Escherichia phage TL-2011c (NC_019442) | stx2A | Shiga toxin 2 subunit A | Virulence | ecoli_vf |
| stx2B | Shiga-like toxin II subunit B | Virulence | ecoli_vf | |
| iss2 | Increase serum survival protein | Virulence | ecoli_vf | |
| Enterobacteria phage HK629 (NC_019711) | iss2 | Increase serum survival protein | Virulence | ecoli_vf |