Table 1.
Number | Description | P_APP_PS1_vs_P_WT | P_WT_5Xn_vs_P_WT | P_APP_PS1_5Xn_vs_P_APP_PS1 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
log2 (Fold Change) |
p Value | Up/Down | log2 (Fold Change) |
p Value | Up/Down | log2 (Fold Change) |
p Value | Up/Down | ||
ko05010 | Alzheimer′s disease | 1.732027242 | 0.017025339 | up | 2.366161715 | 0.003558436 | up | |||
ko04974 | Protein digestion and absorption | 1.00459934 | 0.018638107 | up | ||||||
ko00830 | Retinol metabolism | −4.572428141 | 1.24 × 10−5 | down | −4.157153572 | 1.83 × 10−5 | down | |||
ko04142 | Lysosome | −4.227876257 | 2.30 × 10−5 | down | −3.679825761 | 0.000455767 | down | |||
ko00980 | Metabolism of xenobiotics by cytochrome P450 | −4.66899817 | 7.55 × 10−5 | down | −4.787486299 | 2.55 × 10−5 | down | |||
ko00363 | Bisphenol degradation | −4.919555706 | 0.000142318 | down | −4.808225969 | 0.000339327 | down | |||
ko00195 | Photosynthesis | −5.509890045 | 0.000278555 | down | −4.495865401 | 0.00477363 | down | |||
ko00642 | Ethylbenzene degradation | −4.243304316 | 0.000594088 | down | −4.249603903 | 0.000570651 | down | |||
ko00523 | Polyketide sugar unit biosynthesis | −5.139057953 | 0.000781219 | down | −4.199953052 | 0.011321054 | down | |||
ko00311 | Penicillin and cephalosporin biosynthesis | −1.749057294 | 0.002085877 | down | −1.299383141 | 0.049212447 | down | 1.517322773 | 0.012792112 | up |
ko00253 | Tetracycline biosynthesis | −4.758378649 | 0.004146843 | down | −3.783153775 | 0.028842448 | down | |||
ko00364 | Fluorobenzoate degradation | −1.537476491 | 0.004302729 | down | −1.422606062 | 0.010323156 | down | |||
ko00791 | Atrazine degradation | −1.904490251 | 0.006353534 | down | 1.85619649 | 0.010297892 | up | |||
ko00906 | Carotenoid biosynthesis | −1.136194803 | 0.008280216 | down | −1.047940043 | 0.046641794 | down | |||
ko05200 | Pathways in cancer | −1.582997558 | 0.010892181 | down | ||||||
ko00930 | Caprolactam degradation | −1.339589301 | 0.020127255 | down | −1.479654328 | 0.016294803 | down | |||
ko00903 | Limonene and pinene degradation | −2.82113561 | 0.021578285 | down | −4.301375008 | 0.000240924 | down | |||
ko00643 | Styrene degradation | −1.177109587 | 0.013561769 | down | ||||||
ko00622 | Xylene degradation | −2.887030853 | 0.018878669 | down |
Differential pathways with log2 fold change > 1. Black boldface words indicate representative KEGG pathways. PICRUSt, Phylogenetic Investigation of Communities by Reconstruction of Unobserved States.