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. 2022 Feb 25;17(2):e0263678. doi: 10.1371/journal.pone.0263678

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© 2022 Zainulabid et al

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Fig 2 — (A) Nextstrain clade distribution (inset) of 986 complete genomes of Malaysia SARS-CoV-2 D614G variant (filled circles) (B) Nextstrain clade and lineage distribution (inset) of the Pahang SARS-CoV-2 D614G variants (filled circle). Please see S2 File for the fully annotated tree (C) Phylogenetic relationship of the Pahang SARS-CoV-2 D614G variants (blue branches) with the selected neighbouring representatives (in Nextstrain clade tree) of SARS-CoV-2 genome sequences of African (green branches), Indonesian (red branches) and Malaysian lineages (yellow branches). The tree is reconstructed by Neighbor Joining (NJ) method with 1000 bootstrap replicates. Bootstrap values are indicated at nodes. Note the strong bootstrap support (99%-100%) at the common node of each lineage. In parenthesis city of the subjects are mentioned where arrow heads represent direction of traveling.