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. 2022 Feb 25;5:168. doi: 10.1038/s42003-022-03102-8

Table 1.

Comparison of long-read CYP2D6 typing studies.

Study Platform Num. samples typed Max. multiplex Phasing Chimera removal Fusion calling Copy num. End-to-end pipeline available
Ammar et al.27 ONT MinION 1 1 Yes No No qPCR No
Qiao et al.24 PacBio RS II 39 NP Noa No No qPCR No
Buermans et al.25 PacBio RS II 25 24 Yes Yes PCR PCRb No
Liau et al.26 ONT GridION 32 24 Yes No No PCRb No
This study PacBio Sequel I/II 365 95 Yes Yes PCR + Seq qPCR Yes

NP not provided.

aPhasing performed for a subset of samples using additional allele-specific PCR, not long-read sequencing.

bPresence of duplication and deletion PCR products checked, however precise copy numbers of duplications were not attained.