Antibodies |
Anti-GABA ρ2 Receptor (GABRR2) Rabbit Polyclonal Antibody |
Alomone Labs |
Cat# AGA-007 |
Anti-Secretagogin, Sheep Polyclonal Antibody |
BioVendor |
Cat# RD184120100 |
Bacterial and virus strains |
AAV2.7m8.hSyn.iGluSnFR |
D. Dalkara, Institut de la Vision, Paris, France |
|
AAV2/1-eF1α-DIO-JEDI-2P |
F. St-Pierre, Department of Neuroscience, Baylor College of Medicine, Houston, USA |
|
Chemicals, peptides, and recombinant proteins |
Alexa Fluor 568 hydrazide |
Thermo Fisher |
Cat# A10437 |
Deposited data |
Jupyter notebooks, analysis scripts and data |
This paper |
https://github.com/berenslab/hc-connectivity
|
SBEM dataset e2006 |
22
|
https://www.neuro.mpg.de/connectomics
|
Experimental models: Organisms/strains |
Wildtyp mouse line: C57BL/6J |
The Jackson Laboratory |
Stock No: 000664 |
Transgenic mouse line: Cx57cre/+
|
Own breeding colony |
Ströh et al (2013). PLoS One 8, 15–17 |
Software and algorithms |
KNOSSOS 5.1 |
60
|
www.knossos.app |
FIJI |
63
|
https://imagej.net/software/fiji/
|
Scan M |
M. Müller, MPI for Neurobiology; and T. Euler |
NA |
IGOR Pro 6.3 |
Wavemetrics |
https://www.wavemetrics.com/products/igorpro
|
Python 3.8 |
|
https://www.python.org/
|
R |
|
https://www.r-project.org/
|
Vaa3D |
61
|
https://alleninstitute.org/what-we-do/brain-science/research/products-tools/vaa3d/
|
NeuronC 6.3.50 |
48
|
http://retina.anatomy.upenn.edu/~rob/neuronc.html
|