Table. Characteristics of whole-genome sequences of Vibrio cholerae O141 strains*.
Strain | GC, % | No. contigs | Length, bp | N50 of contigs | Place and year of isolation | cgMLST† |
---|---|---|---|---|---|---|
AD3_609–84 | 47.5 | 136 | 3,959,387 | 195,630 | USA, 1984 | 479 |
AD4_2454–85 | 47.44 | 145 | 4,110,364 | 104,771 | USA, 1985 | 479 |
AD5_2466–85 | 47.42 | 134 | 4,096,622 | 111,701 | USA, 1985 | 479 |
AD6_2527–87 | 47.52 | 140 | 4,073,408 | 111,688 | USA, 1987 | 479 |
AD7_2533–86 | 47.41 | 150 | 4,056,508 | 157,587 | USA, 1986 | 479 |
AD8_F2031 | 47.43 | 101 | 3,976,610 | 187,293 | Spain, 1994 | 246 |
AD9_234–93 | 47.5 | 130 | 4,046,144 | 185,481 | India, 1993 | 479 |
AD10_1178–96 | 47.41 | 118 | 4,082,579 | 101,628 | Taiwan, 1993 | 479 |
*cgMLST, core genome multilocus sequence type; N50, shortest contig length covering 50% of the genome. †The conventional 7-gene MLST profile is ST42 for all.