Table 1.
Detail of PCR primers utilized in this study along with the corresponding annealing temperature for PCR amplification.
| Genes | Reference | Primer pair with sequence (5 –3 ) | Primer | TA | Amplicon |
|---|---|---|---|---|---|
| length (nt) | ( C) | size (bp) | |||
| circRNA-0100 |
Yin et al. (2019) |
F:GCTCGGAGTTGGCATTCATC |
20 |
57 |
144 |
| |
|
R:TCAACTAATCCGTAACAGGTCAA |
20 |
|
|
| CHD9 |
XM_005691972.3 in GenBank |
F:ACTTGGGTGCAGAATTTGAAC |
21 |
55 |
181 |
| |
|
R:AACTGAGAGTGTGGCGATAAC |
21 |
|
|
| Keratin 6 |
Yin et al. (2020) |
F:CAGTCGCAGCCTCTACAACCT |
21 |
56 |
159 |
| |
|
R:CAAATGCCACCTCCATAACCA |
21 |
|
|
| Keratin 7 |
Yin et al. (2020) |
F:GAGTTTGTGGTGTTGAAGAA |
20 |
56 |
194 |
| |
|
R:AAGTCCAGGGAGCGGTTGTT |
20 |
|
|
| Keratin 8 |
Yin et al. (2020) |
F:TCCTTCAGCAGCCGCTCCTA |
20 |
58 |
160 |
| |
|
R:CTGTAATGCCCCCCAAACCT |
20 |
|
|
| Keratin 16 |
Yin et al. (2020) |
F:CCTTTGTGGCTAGTGGTATG |
20 |
55 |
188 |
| |
|
R:CAGTTTCAGGGGTTGCTTAT |
20 |
|
|
| Keratin 17 |
Yin et al. (2020) |
F:GGGGAATGGAAACAGAGGAG |
20 |
56 |
112 |
| |
|
R:GAGGAGAGAAGCCCAAGATG |
20 |
|
|
| KLF5 |
KU041751 in GenBank |
F:CCACCTCCATCCTATGCTGC |
20 |
56 |
134 |
| |
|
R:TCCAAATCGGGGTTACTCCT |
20 |
|
|
| UBC |
Bai et al. (2014) |
F:GCATTGTTGGGTTCCTGTGT |
20 |
52 |
90 |
| |
|
R:TTTGCATTTTGACCTGTGAG |
20 |
|
|
| YWHAZ |
Bai et al. (2014) |
F:TGTAGGAGCCCGTAGGTCATCT |
22 |
56 |
102 |
| |
|
R:TTCTCTCTGTATTCTCGAGCCATCT |
25 |
|
|
| SDHA |
Bai et al. (2014) |
F:AGCACTGGAGGAAGCACAC |
19 |
53 |
105 |
| |
|
R:CACAGTCGGTCTCGTTCAA |
19 |
|
|
| KLF5
|
The present study |
F:TTAGTTTAATTTGTTAGAGAGGTTGTG |
27 |
54 |
262 |
| |
|
R:TACCCCACRACTACTAACACTTA |
23 |
|
|
| miR-20b-5p |
MIMAT0036056 in miRNAsong |
F:CGCAAAGTGCTCACAGTGCAGGTAG
|
25 |
63 |
NA |
| miR-29a-3p |
MIMAT0036113 in miRNAsong |
F:CGTAGCACCATCTGAAATCGGTT |
23 |
61 |
NA |
| miR-153-5p |
MIMAT0035983 in miRNAsong |
F:CGTTGCATAGTCACAAAAGTGATC |
24 |
60 |
NA |
| miR-24-3p |
MIMAT0036091 in miRNAsong |
F:CGTGGCTCAGTTCAGCAGGAAC |
22 |
60 |
NA |
| let-7c-3p |
MIMAT0035885 in miRNAsong |
F:CGCTGTACAACCTTCTAGCTTTCC |
24 |
60 |
NA |
| let-7d-5p |
Bai et al. (2016) |
F:CGAGAGGTAGTAGGTTGCATAGTT |
24 |
62 |
NA |
| miR-26a-5p |
Bai et al. (2016) |
F:CGTTCAAGTAATCCAGGATAGGCT |
24 |
61 |
NA |
| miR-15a-5p | Bai et al. (2016) | F:CGTAGCAGCACATAATGGTTTGTG | 24 | 63 | NA |
F: forward, R: reverse. TA: annealing temperature. NA: not available. KLF5 was used for the designing of BSP primers. miRNAsong: https://www2.med.muni.cz/histology/miRNAsong/index.php last access: 16 April 2021.