Table 1.
QTLs for FaOH and FaDOH concentrations measured in roots of carrot F2 progeny CA and parameters of 2-LOD confidence intervals
| Genetic 2-LOD interval (cM) | Physical 2-LOD interval (Mbp) | Markers 2-LOD interval | QTL effect (mean)a | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Substance | QTL | Chrom. | LOD | % Var. | Start | Peak | Stop | Start | Peak | Stop | Start | Peak | Stop | AA | AB | BB |
| FaOH | FaOH_1.1 | 1 | 4,34 | 5,57 | 4,8 | 22,4 | 53,6 | 824,774 | 540,6415 | 47,969,302 | K0514 | K4057 | K1504 | 4,79 | 5,03 | 5,43 |
| FaOH | FaOH_3.1 | 3 | 8,99 | 9,93 | 41,2 | 42,8 | 57,5 | 43,925,869 | 45,134,655 | 49,341,067 | K1064 | K1792 | K0474 | 4,63 | 5,12 | 5,28 |
| FaOH | FaOH_4.1 | 4 | 14,48 | 8,41 | 32,9 | 40,4 | 47,8 | 13,388,045 | 20.392970 | 33,347,895 | K3873 | K3654 | K1382 | 4,70 | 5,21 | 5,76 |
| FaOH | FaOH_5.1 | 5 | 3,64 | 6,88 | 17,8 | 33,3 | 53,6 | 524,0197 | 22,019928 | 41,938,893 | K2562 | K1670 | mCA4358 | 4,75 | 5,11 | 5,09 |
| FaOH | FaOH_8.1 | 8 | 3,89 | 6,18 | 8,9 | 21,5 | 51,2 | 200,9986 | 521,4614 | 31,631,123 | K2093 | K1762 | K1770 | 4,90 | 4,92 | 5,34 |
| FaOH | FaOH_9.1 | 9 | 16,71 | 15,35 | 13,0 | 16,1 | 21,8 | 434,2239 | 637,6534 | 11,832,494 | K0850 | K3482 | K3568 | 4,50 | 5,17 | 5,59 |
| FaDOH | FaDOH_1.1 | 1 | 4,45 | 7,28 | 4,8 | 31,9 | 53,6 | 824,774 | 21,266,018 | 47,969,302 | K0514 | K4090 | K1504 | 6,72 | 6,78 | 7,29 |
| FaDOH | FaDOH_4.1 | 4 | 21,81 | 8,51 | 32,9 | 35,5 | 48,4 | 13,388,045 | 15,954,204 | 33,764,607 | K3873 | K1837 | K0154 | 6,54 | 6,99 | 7,48 |
| FaDOH | FaDOH_5.1 | 5 | 7,06 | 8,30 | 35,7 | 39,4 | 46,0 | 25,598,051 | 33,366,279 | 39,470,106 | K0871 | K3010 | K1404 | 6,61 | 6,83 | 7,15 |
| FaDOH | FaDOH_9.1 | 9 | 40,35 | 24,55 | 13,0 | 16,1 | 18,9 | 434,2239 | 637,6534 | 849,4898 | K0850 | K3482 | K3359 | 6,27 | 6,97 | 7,49 |
| FaDOH/FaOH | Ratio_3.1 | 3 | 17,27 | 18,29 | 40,2 | 42,8 | 50,7 | 43,339,133 | 45,134,655 | 47,622,391 | K0980 | K1792 | K1640 | 1,52 | 1,34 | 1,28 |
| FaDOH/FaOH | Ratio_8.1 | 8 | 5,00 | 5,11 | 8,9 | 21,5 | 51,2 | 200,9986 | 521,4614 | 31,631,123 | K2093 | K1762 | K1770 | 1,42 | 1,40 | 1,28 |
aAlleles of QTL effects: A - Parent P_345B; B - Parent P_1870