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. 2022 Mar 2;14:26. doi: 10.1186/s13073-022-01033-x

Table 1.

Classification metrics of SVM

Performance metrics The classification metrics of SVM across three data sets
Training set (LOOCV, n = 202) Internal validation set (n = 120) External validation set (n = 101)
Accuracy (95% CI) 0.876 (0.823–0.918) 0.875 (0.802–0.928) 0.861 (0.778–0.922)
Sensitivity (95% CI) 0.975 (0.913–0.997) 0.885 (0.766–0.956) 0.761 (0.612–0.874)
Specificity (95% CI) 0.811 (0.731–0.877) 0.868 (0.764–0.938) 0.945 (0.849–0.989)
Positive predicted value 0.772 (0.678–0.850) 0.836 (0.712–0.922) 0.921 (0.786–0.983)
Negative predicted value 0.980 (0.930–0.998) 0.908 (0.810–0.965) 0.825 (0.709–0.909)
Kappaa 0.752 0.747 0.717
F1a 0.862 0.860 0.833

aKappa measured the agreement between the predicted classification with true labels. F1 was the harmonic average of precision (positive predicted value) and recall rates (sensitivity)