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. 2022 Mar 1;11(1):730–740. doi: 10.1080/22221751.2022.2043727

Table 4.

Human MHC-I epitope analysis for peptide 2.

Allele Peptide number MHC-I binding Immunogenicity Proteasome Score TAP Score MHC Score Processing Score TAP Total Score
HLA-A*02:01 2 0.02 0.18048 1.39 0.39 −0.66 1.78 1.12
HLA-B*08:01 2 0.02 0.14268 1.39 0.39 −1.31 1.78 0.47
HLA-A*23:01 2 0.03 0.19092 1.36 1.13 −1.38 2.5 1.12
HLA-A*02:03 2 0.03 0.18064 1.39 0.39 −0.91 1.78 0.87
HLA-A*24:02 2 0.04 0.19092 1.36 1.13 −1.67 2.5 0.83
HLA-A*02:06 2 0.04 0.18064 1.39 0.39 −0.96 1.78 0.82
HLA-A*33:01 2 0.09 0.18048 0.76 0.68 −1.13 1.43 0.3
HLA-B*35:01 2 0.1 0.18064 1.41 1.19 −2.35 2.6 0.25
HLA-A*03:01 2 0.12 0.18064 0.89 0.18 −1.35 1.06 −0.29
HLA-A*32:01 2 0.21 0.18064 1.39 0.39 −2.21 1.78 −0.43
HLA-B*53:01 2 0.21 0.18064 1.41 1.19 −3.4 2.6 −0.8
HLA-A*01:01 2 0.23 0.18424 1.41 1.24 −2.91 2.65 −0.26
HLA-B*15:01 2 0.29 0.18064 1.41 1.28 −1.79 2.69 0.89
HLA-A*30:02 2 0.35 0.19092 1.41 1.28 −2.29 2.69 0.4
HLA-A*31:01 2 0.45 0.18064 0.76 0.68 −1.9 1.43 −0.47
HLA-A*26:01 2 0.52 0.18048 1.41 1.28 −4.14 2.69 −1.45
HLA-A*11:01 2 0.53 0.18064 0.89 0.18 −1.63 1.06 −0.57
HLA-B*58:01 2 0.55 0.18064 1.36 1.06 −3.33 2.42 −0.9
HLA-B*57:01 2 0.56 0.18064 1.36 1.07 −3.39 2.43 −0.95
HLA-B*51:01 2 0.65 0.18064 1.41 1.28 −4.36 2.69 −1.67
HLA-B*07:02 2 0.72 0.18064 1.41 1.19 −3.75 2.6 −1.15
HLA-A*30:01 2 0.73 0.18424 1.41 1.28 −3.73 2.69 −1.05
HLA-A*68:02 2 1.4 0.18064 1.39 0.39 −3.11 1.78 −1.33
HLA-B*44:03 2 1.6 0.18424 1.41 1.28 −4.01 2.69 −1.33
HLA-B*44:02 2 1.9 0.18424 1.41 1.28 −4.16 2.69 −1.47
HLA-A*68:01 2 2.4 0.18064 0.76 0.68 −2.33 1.43 −0.9
HLA-B*40:01 2 3.1 0.18048 1.41 1.28 −4.44 2.69 −1.75

Notes:

1. MHC-I binding score was between 0 and 2. < 0.5 strong binder, 0.5-2 weak binder, > 2 non-binder.

2. The high Immunogenicity score means the degree of the peptide conformity to sequence preference was good.

3. The higher the TAP total score, the higher the likelihood that the peptide will be presented after being swallowed by DCs.