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. 2022 Jan 31;9(3):52–68. doi: 10.15698/mic2022.03.771

TABLE 2.

Oligonucleotides used in binding assays. SμG oligo can adopt a G4 conformation while the M1 oligos cannot. Guanine-runs in SμG oligo are in bold. G>A mutations in M1 oligo introduced to disrupt guanine-runs are indicated as lowercase letters.

Oligo Sequence Length G-score*
SμG 5′GAGCTGGGGTGAGCTGGGCTGAGCTGGGGTGAGCTGGGCTGAGCT 45 nt 70
M1 5′GAGCTGaGGTGAGCTGGGCTGAGCTGaGGTGAGCTGGGCTGAGCT 45 nt N/A
*

G-score was calculated using QGRS Mapper (https://bioinformatics.ramapo.edu/QGRS/index.php; parameters: Max Length – 44, Min G-Group Size – 3, and Loop Size – 0 to 10).