Table 2. Automated Annotation of Additional Studiesa.
| study/dataset | species | sample | chromatography/MS instrument | annotations correct/reported | precision (%) | recall (%) | no ref. |
|---|---|---|---|---|---|---|---|
| AT+ | Homo sapiens | adipose tissue | HILIC/Waters Synapt Q-ToF, ESI+ | 26/37 | 81.3 | 83.9 | 2 (5.4%) |
| AT– | Homo sapiens | adipose tissue | HILIC/Waters Synapt Q-ToF, ESI– | 16/21 | 84.2 | 88.9 | 2 (9.5%) |
| MTBLS666 | Sus scrofa | amniotic fluid | RP-C18/Waters Synapt Q-ToF, ESI– | 3/32 | 60.0 | 10.0 | 27 (84.4%) |
| MTBLS816 | Homo sapiens | urine | HILIC Positive/Agilent Q-ToF, ESI+ | 31/107 | 88.6 | 30.1 | 60 (56.1%) |
Adipose tissue extract (AT) HILIC datasets and two publicly available datasets from the MetaboLights repository (MTBLS). Precision and recall refer to rank 1 automated annotations. No ref.—Annotations missed due to the absence of reference from the library. Annotations reported by the studies were level 2 and 3 except for MTBLS816 which is mostly composed of level 1 annotations (105 of 107).