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. Author manuscript; available in PMC: 2023 Feb 3.
Published in final edited form as: IEEE/ACM Trans Comput Biol Bioinform. 2022 Feb 3;19(1):107–120. doi: 10.1109/TCBB.2021.3058941

TABLE 2:

The average sensitivity/specificity (sens./spec.) scores of competing algorithms on all datasets. The best results are highlighted in bold and the symbol • indicates that Dropfeature-DNNs obtains a better sensitivity/specificity than the corresponding method regarding a pairwise t-test with a 95% confidence interval.

Measurement sens./spec. [%]
Dataset/Method DNNs LASSO-SVM GBFS-SVM LASSO-DNNs GBFS-DNNs SNMF CNN Dropout DNP Dropfeature-DNNs
ALL 70.5•/74.6• 75.2•/78.7• 76.6•/81.3• 77.4•/79.8• 80.2•/84.0• 87.8/86.4• 82.3•/83.5• 85.8•/84.7• 86.3•/85.7• 88.6/90.8
GCM 55.8•/57.3• 64.6•/70.4• 71.2•/67.5• 69.5•/65.7• 71.3•/72.6• 71.9•/74.4• 70.3•/71.2• 71.0•/73.6• 70.4•/75.2• 73.8/78.5
NCI Tumors 63.4•/66.5• 63.8•/69.6• 65.7•/69.3• 70.1•/72.8 71.8•/70.3• 75.1•/72.3 72.1•/71.3 72.5•/73.8 73.6•/70.1• 78.6/71.2
Lung Cancer 81.5•/85.6• 80.8•/86.7• 84.2•/88.5• 87.9•/86.4• 87.8•/90.9• 91.5•/92.6 88.5•/89.3• 90.6•/92.0 92.1•/91.5 94.7/92.2
COAD 60.8•/62.3• 58.7•/61.3• 59.1•/61.8• 63.2•/64.9• 72.4•/70.5 73.5/76.8 70.4•/71.1 71.8•/70.3 72.3•/68.4 74.6/69.1
ENCA (subtype) 59.4•/61.7• 62.6•/67.3• 64.6•/63.2• 69.2•/71.8• 72.6/73.9• 70.5•/71.3• 71.5•/69.6• 72.0•/71.3• 71.4•/69.5• 73.6/75.9
ENCA (stage) 69.7•/71.8• 70.3•/72.5• 71.6•/74.3• 70.5•/75.6• 73.4•/75.8• 78.2•/77.6• 75.5•/76.3• 75.2•/78.8• 76.6•/79.1• 81.5/83.8
PRAD 68.1•/69.2• 68.8•/70.5• 71.3•/75.1• 73.6•/76.8• 75.2•/77.3• 75.8•/78.4• 74.4•/73.6• 76.0•/78.4• 76.4•/80.2• 80.6/82.9