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. 2021 Nov 8;49(6):2749–2765. doi: 10.1042/BST20210706

Table 1. Comparison of various membrane mimetic and substitute technologies.

TOOL ADVANTAGES/BENEFITS DISADVANTAGES/CHALLENGES EXAMPLES
LIPOSOMES
  • Closely mimics native membrane (fluidity, width, phase transitions)

  • Mediates complex assembly

  • Diffusion on surface is possible

  • Encapsulate dyes, reagents, etc.

  • Compartment forming (chemical gradients, assays, etc)

  • Easily deposited onto a surface

  • Simple to produce, size is controllable.

  • Instability - prone to burst or aggregate

  • Heterogeneous (composition, protein binding, size)

  • Not effective for solubilisation

  • Difficult to freeze, requires thick ice and complicates high-resolution cryoEM reconstruction (strong incoherent signal)

  • Large enough to scatter light

  • Screening lipid compositions is low throughput

CryoEM (1–4) AFM (5,6) SCC (7) LM (8)

NANODISCS

  • MSP1D1

  • cMSP26

  • NW50

  • Highly stable

  • Can derive lipids native bilayers

  • Smaller than liposomes (reducing ice thickness for cryoEM studies)

  • Stabilisation of hydrophobic regions (like detergent)

  • Mediates complex assembly

  • Amenable to further purification

  • Genetically encoded allowing customisation

  • Click-chemistry compatible

  • Lipids in nanodiscs have altered properties compared to lipids in cell membranes

  • Low surface area (diffusion dependent process)

  • Production and purification are labour intensive

  • Often requires extensive optimisation

  • Poor efficiency of nanodisc formation, not effective for solubilisation

  • Sizes are relatively limited

CryoEM (9–13)
DETERGENT
  • Simple and convenient means of solubilisation

  • A broad selection with different chemistries

  • Can induce spontaneous oligomerisation and/or pore formation

  • Amenable to further purification

  • Do not provide a surface for assembly

  • Detergent micelles are topologically different to native membranes

  • Can introduce structural artefacts

  • Protein stability is often an issue

  • Lack protein/lipid interactions

  • Empty micelles can interfere with cryoEM image processing

CryoEM (14–20)
AMPHIPOLS
  • Less likely to destabilise structure compared to detergent

  • Stable, even when diluted

  • Can be chemically modified or conjugated

  • No interference with light-based experiments

  • Does not provide an assembly surface

  • Not suitable at acidic pH or in excessive divalent ions.

  • Cannot directly solubilise MPs

  • Difficult to synthesis

  • Polydisperse

CryoEM (21–24)
SMALPS
  • Detergent-free solubilisation of MPs.

  • Maintain native lipids after solubilisation. Useful for lipidomics.

  • Protein-lipids interactions are retained to a greater extent

  • Compatible with further purification

  • Highly stable once SMA disc forms

  • Does not form micelles

  • Difficult to synthesise

  • Polydisperse sizes

  • Native bilayer properties are not preserved.

  • Expensive

  • Can affect protein purification

CryoEM (25) MS (26) SCC (27)
PEPTIDISC & SAPOSIN
  • Diameter of the disc is dependent on the protein diameter

  • Works at low pH

  • Genetically encoded

  • Easy to produce in large quantities

  • No assembly surface

  • Does not preserve bilayer properties

IN SITU
  • Direct observation of sample in native environment

  • Low resolution

  • Low throughput

  • Technically complex

CryoET (28,29) AFM (30,31) SCC (32)
SUPPORTED LIPID BILAYERS
  • Enables visualisation of diffusion dependent processes

  • Large surface area

  • Simple and readily applicable to AFM, SPR, TIRF, etc.

  • Lipid diffusion is significantly reduced compared to native bilayers

  • Can easily study and visualise phase transition properties

AFM (5,6,33–35) LM (36–38)