LIPOSOMES |
Closely mimics native membrane (fluidity, width, phase transitions)
Mediates complex assembly
Diffusion on surface is possible
Encapsulate dyes, reagents, etc.
Compartment forming (chemical gradients, assays, etc)
Easily deposited onto a surface
Simple to produce, size is controllable.
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Instability - prone to burst or aggregate
Heterogeneous (composition, protein binding, size)
Not effective for solubilisation
Difficult to freeze, requires thick ice and complicates high-resolution cryoEM reconstruction (strong incoherent signal)
Large enough to scatter light
Screening lipid compositions is low throughput
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CryoEM (1–4) AFM (5,6) SCC (7) LM (8) |
NANODISCS
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Highly stable
Can derive lipids native bilayers
Smaller than liposomes (reducing ice thickness for cryoEM studies)
Stabilisation of hydrophobic regions (like detergent)
Mediates complex assembly
Amenable to further purification
Genetically encoded allowing customisation
Click-chemistry compatible
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Lipids in nanodiscs have altered properties compared to lipids in cell membranes
Low surface area (diffusion dependent process)
Production and purification are labour intensive
Often requires extensive optimisation
Poor efficiency of nanodisc formation, not effective for solubilisation
Sizes are relatively limited
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CryoEM (9–13) |
DETERGENT |
Simple and convenient means of solubilisation
A broad selection with different chemistries
Can induce spontaneous oligomerisation and/or pore formation
Amenable to further purification
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Do not provide a surface for assembly
Detergent micelles are topologically different to native membranes
Can introduce structural artefacts
Protein stability is often an issue
Lack protein/lipid interactions
Empty micelles can interfere with cryoEM image processing
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CryoEM (14–20) |
AMPHIPOLS |
Less likely to destabilise structure compared to detergent
Stable, even when diluted
Can be chemically modified or conjugated
No interference with light-based experiments
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Does not provide an assembly surface
Not suitable at acidic pH or in excessive divalent ions.
Cannot directly solubilise MPs
Difficult to synthesis
Polydisperse
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CryoEM (21–24) |
SMALPS |
Detergent-free solubilisation of MPs.
Maintain native lipids after solubilisation. Useful for lipidomics.
Protein-lipids interactions are retained to a greater extent
Compatible with further purification
Highly stable once SMA disc forms
Does not form micelles
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CryoEM (25) MS (26) SCC (27) |
PEPTIDISC & SAPOSIN |
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IN SITU
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Low resolution
Low throughput
Technically complex
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CryoET (28,29) AFM (30,31) SCC (32) |
SUPPORTED LIPID BILAYERS |
Enables visualisation of diffusion dependent processes
Large surface area
Simple and readily applicable to AFM, SPR, TIRF, etc.
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AFM (5,6,33–35) LM (36–38) |