Table 1.
Consensus mutations of lineage A.27 (n = 1386).
| 75% of sequences | 90% of sequences | gene | amino acid substitution |
|---|---|---|---|
| A361G | A361G | ORF1a | synonymous |
| C1122T | C1122T | ORF1a | P286L |
| C2509T | C2509T | ORF1a | synonymous |
| C8782T | C8782T | ORF1a | synonymous |
| A9204G | A9204G | ORF1a | D2980G |
| A11217G | A11217G | ORF1a | N3651S |
| C16293T | – | ORF1b | synonymous |
| C16466T | C16466T | ORF1b | P5401L |
| A18366G | A18366G | ORF1b | synonymous |
| A20262G | A20262G | ORF1b | synonymous |
| C21614T | C21614T | S | L18F |
| G22468T | G22468T | S | synonymous |
| T22917G | T22917G | S | L452R |
| A23063T | A23063T | S | N501Y |
| C23520T | – | S | A653V |
| C23525T | C23525T | S | H655Y |
| G23948T | G23948T | S | D796Y |
| G25218T | G25218T | S | G1219V |
| T25541C | T25541C | ORF3a | V50A |
| del:26160:8 | – | ORF3a | del257/258fsX6 |
| C27247T | C27247T | ORF6 | synonymous |
| T28144C | T28144C | ORF8 | L84S |
| del:28248:6 | del:28248:6 | ORF8 | del:119/120 |
| A28273T | A28273T | NCR | synonymous |
| G28878A | G28878A | N | S202N |
| G29742A | – | NCR | synonymous |