Chemical Methods
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(i) Collagen and glycosaminoglycans (GAGs) damage |
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(Ott et al., 2008) |
Acid—base |
Cell membrane solubilization |
(ii) Insufficient cell removal |
Rat heart |
(Syed et al., 2014) |
Peracetic acid |
Disruption of cytoplasmic components and nucleic acids by utilizing charges |
(iii) Increased ECM stiffness |
Small intestine submucosa |
Gilpin and Yang, (2017)
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Ethylenediaminetetra-acetic acid (EDTA) |
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(iv) Decreases salt- and acid-soluble ECM proteins |
Urinary bladder |
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Reversible alkaline swelling |
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(v) Alters mechanical properties |
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Triton X (100 or 200) |
Disruption of lipid–lipid and lipid–protein unions, while leaving protein interactions |
(i) Not recommended for ECM when lipids and GAGs are important components |
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(Wagner et al., 2014); Rieder et al. (2004)
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Very effective in some tissues |
(ii) Limited potential by immunogenicity in vivo
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Normal and emphysematous human lungs |
Less damaging to tissue structures than ionic surfactants |
(iii) Triton X-200 needs to be combined with a zwitterionic detergent to be effective |
Porcine heart valves |
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(iv) Triton X-200 damages the matrix similar to SDS |
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Sodium dodecyl sulfate (SDS) |
Liquefaction of internal and external cell membranes |
Tends to denaturalize proteins and induce nuclear and cytoplasmic waste in the remaining matrix (i) Cytotoxic: requires extensive washing steps |
Rat forearm |
(Yang et al., 2015); (Gilpin and Yang, 2017); Wang et al. (2010)
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(ii) Alters microstructure (i.e., collagen fibers) |
Porcine tissues (cornea, myocardium, heart valve, small intestine, kidney) |
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Human vein, lungs and heart |
Witterionic, nondenaturing detergent, 3-[(3-cholamidopropyl) dimethylammonio]-1-propanesulfonate (CHAPS) |
Properties of ionic and nonionic detergents |
(i) Similar damage as Triton X-100 |
Human and porcine-derived lung tissues |
(Gilpin and Yang, 2017); O'Neill et al. (2013)
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Maintenance of structural ECM proteins and ultrastructure |
(ii) Remanent cytoplasmic proteins |
Rat lungs |
Tributyl phosphate (TBP) |
Destructor of protein structures |
Variable results, leads to collagen degradation but keeping the mechanical properties |
Equine flexor tendons, ligaments and articular cartilage |
(Deeken et al., 2011); Elder et al. (2009)
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Disruption of protein–protein interactions |
Hypertonic and hypotonic solutions |
Solutions with a higher/lower solute concentration than that in cells |
High amount of cell waste in the remaining matrix |
Bovine vessel nerve, small intestinal and submucosa |
(Zhang et al., 2022); Kim et al. (2016)
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Cell lysis, cell dehydration and cell death because of their osmotic pressure |
Enzymatic Methods
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Trypsin |
Digestion of membrane proteins leading to cell dead |
(i) Can damage the proteins in the ECM, in particular laminin and GAGs |
Porcine pulmonary valves and trachea |
Giraldo-Gomez et al. (2016)
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Commonly used with EDTA |
(ii) Breaks cell-matrix adhesions |
Pepsin |
It targets peptide bonds |
Causes high damage in the ECM proteins if left for long periods of time |
Porcine lung and liver |
(Pouliot et al., 2020); Coronado et al. (2017)
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nuclease |
Hydrolysis of DNA and RNA |
Further cleaning and enzyme removal is required, as they may promote immune response |
Bovine osteochondral plugs, human corneal limbus and porcine dermis |
(Greco et al., 2015); Fermor et al. (2015)
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Physical Methods
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Thermal shock (freeze-thaw cycle) |
Disruption of tissue and organ cells |
(i) The freeze-thaw cycle causes a small degradation in the structure of the ECM, due to the crystal shape that may damage the scaffold, with little effect on the mechanical properties of ECM |
Tendon fragments (large), fibroblast sheets, lumbar vertebrae cells, kidneys, lungs and adipose tissues |
(Rabbani et al., 2021); Zhao et al. (2019)
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Frozen water crystals occupy the volume inside the cell and cause the membrane to burst |
(ii) The heat shock cycle alone is not capable of removing sensitive cellular components |
Force |
Mechanical pressure can be enough to induce cell lysis |
(i) Limited to tissues with hard structures, as it can damage the ECM structure |
Liver, lung |
Gilpin and Yang, (2017)
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(ii) The amount of required force must be precise since both the underlying structure and membrane attachment are vulnerable to any kind of direct mechanical stress |
Immersion and agitation |
It is commonly used to facilitate chemical agent infiltration to induce cell lysis |
Aggressive processes, such as sonication, can damage the ECM. |
Submucosal substrate, laryngeal and intestine tissues |
Keane et al. (2015)
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The immersion time and intensity of agitation depend on the thickness and density of the tissue |
Vacuum-assisted decellularization (VAD) |
VAD would accelerate and improve the delivery and efficiency of detergents into the deepest parts of the tissue |
It is not a decellularization method but a facilitator |
Porcine tracheal specimen and fresh porcine costal cartilage |
Alizadeh et al. (2019)
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Removal of detergents from a decellularized tissue is the other application of the VAD methodology |
Hydrostatic pressure (water is sprayed with pressure on the target tissue) |
Application of high pressure (>600 MPa) to the tissue and induction of cell lysis |
(i) Excessive pressure can damage the structure |
Porcine retinal specimen, porcine artery, porcine meniscus and rat uterine |
Rabbani et al. (2021)
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(ii) The formation of ice crystals caused by the presence of water may damage the ECM structure |
(iii) Increasing the temperature during the process may suppress the creation of the ice crystals, but may increase the entropy and lead to the ECM vulnerability |
(iv) Residue of DNA fragments |
(v) Denatures ECM proteins |
Nonthermal irreversible electroporation |
Microsecond electrical pulses are applied throughout a tissue, causing micropores in the cell membrane |
The relatively small electrodes that limit the size of the tissue for decellularization |
Carotid arteries of rat, liver of porcine and myocardial muscle tissue |
Rabbani et al. (2021)
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Ultrasonic waves (sonication) |
High-power waves are capable of disrupting intermolecular bonds, disrupting the cell membrane, and removing its internal components |
The physical phenomenon of cavitation during the process is unavoidable, but uncontrolled cavitation can severely damage the structure and mechanical properties of the tissue |
Aortic tissues, small intestine, cartilage tissue and meniscus |
Forouzesh et al. (2019)
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Pressure gradient |
Induction of a pressure gradient can help the enzyme-mediated decellularization method |
To be determined |
Embryonic veins, tendon, and aortic tissue |
Sierad et al. (2015)
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Supercritical fluid |
Removal of cell debris. It is used in combination with detergents |
To be determined |
Porcine pericardium, aorta and retinal tissues |
Guler et al. (2017)
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Reduction of the detrimental effect on the ECM mechanical properties |
Perfusion |
The organ is completely separated from its main blood vessel and the chemical agents are injected into its vascular system after being washed with detergents |
(i) The required pressure to drive the agent along the vascular system can cause the capillaries and small vessels to tea |
Heart muscle, lung, liver, kidney, pancreas, small intestine, skeletal muscle, coronary artery |
Tajima et al. (2020)
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(ii) The flow rate control is crucial |