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. 2022 Mar 4;23:177. doi: 10.1186/s12864-022-08410-1

Table 3.

Numbers of DEGs in comparisons between genotypes and between HT and OT. DEGs in comparisons of variants HT v. OT for three genotypes at two time points (|log2(FC)| > 3, corrected P value < 0.01)

Genotype Regulation Number of DEGs
1 d 10 d Common between 1 d and 10 d (different direction)
BW Down 1001 28 52 (24)
Up 235 235
Total 1236 263
BW827 Down 808 314 119 (21)
Up 401 204
Total 1209 518
BW828 Down 466 317 79 (23)
Up 204 185
Total 670 502