Antibodies |
|
|
anti-HSV-1 ICP4 Immediate Early Protein [10F1], mouse monoclonal |
Abcam |
cat #ab6514; RRID:AB_305537 |
anti-HSV-1 ICP0 [5H7], mouse monoclonal |
Abcam |
cat #ab6513; RRID:AB_305536 |
anti-HSV ICP5, mouse monoclonal |
Virusys Corporation |
cat #HA018; RRID:AB_2713935 |
anti-VSV-G tag [P5D4], mouse monoclonal |
Abcam |
cat #ab50549; RRID:AB_883494 |
anti-VacV I3 |
Dr. David Evans (University of Alberta, Edmonton, Canada) |
N/A |
anti-VacV G8 |
Dr. Paula Traktman (Medical University of South Carolina, Columbia, SC, USA) |
N/A |
anti-VacV A25 |
Dr. Yan Xiang (University of Texas Health Sciences Center, Austin, TX, USA) |
N/A |
anti-VacV A27 |
Life Technologies |
cat #J97Q |
anti-IFNβ antibody |
Millipore-Sigma |
cat #ab1431; RRID:AB_90638 |
anti-Flag DYKDDDDK Tag [D6W5B] for IF, rabbit monoclonal |
Cell Signaling Technology |
cat #15009; RRID:AB_2798687 |
anti-DNA-PK, mouse monoclonal |
Cell Signaling Technology |
cat #12311, 3H6; RRID:AB_2797881 |
anti-IRF9 |
Cell Signaling Technology |
cat #76684, D2T8M; RRID:AB_2799885 |
anti-HSPA8, rat |
Enzo |
cat #ADI-SPA-815-J, 1B5 |
anti-tyrosinated tubulin, rat |
Dr. Gregg Gunderson (Columbia University, New York, NY, USA) |
N/A |
anti-GFP |
Abcam |
cat #ab13970; RRID:AB_300798 |
anti-pIRF3, phospho S386 |
Abcam |
cat #ab76493: RRID:AB_1523836 |
anti-FEZ1, rabbit monoclonal |
Cell Signaling Technology |
cat #42480, D9R8Q; RRID:AB_2799222 |
anti-FEZ1, mouse monoclonal |
Abnova |
cat #H00009638-B02P |
anti-PKR |
Cell Signaling Technology |
cat #12297, D7F7; RRID:AB_2665515 |
anti-MxA |
Cell Signaling Technology |
cat #37849, D3W7I; RRID:AB_2799122 |
anti-MxB |
Cell Signaling Technology |
cat #43924, E7Y8H |
anti-ISG56 |
Cell Signaling Technology |
cat #14769, D2X9Z; RRID:AB_2783869 |
anti-IRF3 |
Cell Signaling Technology |
cat #11904, D6I4C; RRID:AB_2722521 |
anti-IRF7 |
Cell Signaling Technology |
cat# 72073, D8V1J |
anti-Lamin B1 |
Cell Signaling Technology |
cat #13435, D9V6H; RRID:AB_2737428 |
anti-NF-kB |
Cell Signaling Technology |
cat #8242, D14E12; RRID:AB_10859369 |
anti-GAPDH |
Santa Cruz.Antibodies |
cat #sc-25778; RRID:AB_10167668 |
anti-phospho-S58-FEZ1 |
Dr. John Jia En Chua (Max Planck Institute for Biophysical Chemistry, Gottingen, Germany) |
N/A |
anti Rabbit IgG, HRP |
GE Healthcare UK |
cat #NA934V |
anti Mouse IgG, HRP |
GE Healthcare UK |
cat #NA931V |
anti Rat IgG, HRP |
Invitrogen |
cat #PA1-28664 |
anti-Rat secondary, Alexa 647 |
Jackson ImmunoResearch |
cat #712-605-150; RRID:AB_2340693 |
anti-Mouse secondary, Alexa 488 |
Life Technologies |
cat #A21202; RRID:AB_141607 |
anti-Rabbit secondary, Alexa 488 |
Life Technologies |
cat #A21206; RRID:AB_2535792 |
Bacterial and virus strains |
|
|
Escherichia coli (E. coli) DH5α strain |
Thermo Fisher Scientific |
cat #18265017 |
HSV-1 |
Dr. Ian Mohr (NYU-Lagone, New York, NY, USA) |
N/A |
VACV (WR) |
Dr. Stewart Shuman (Sloan-Kettering Institute, New York NY, USA) |
N/A |
Chemicals, peptides, and recombinant proteins |
|
|
ProteaseMAX |
Promega |
cat #V207A |
Trypsin Gold |
Promega |
cat #V528A |
Pierce Spin Columns with C18 resin |
Thermo Fisher Scientific |
cat #89879 |
microBCA protein assay kit |
Thermo Fisher Scientific |
cat #23235 |
nanoViper trap column |
Thermo Fisher Scientific |
cat #164535 |
nanoViper analytical column |
Thermo Fisher Scientific |
cat #164942 |
G-sepharose |
GE Healthcare |
cat #17-0618-01 |
Lipofectamine 2000 Transfection Reagent |
Thermo Fisher Scientific |
cat # 11668019 |
CT DNA |
Sigma |
cat #D4764 |
Nu-7441 DNA-PK inhibitor |
SelleckChem |
cat #S2638 |
Polybrene |
Santa Cruz Biotechnology |
cat #sc-134220 |
FluroSave Reagent |
MilliporeSigma |
cat #345789 |
Hoechst 33342 |
Thermo Fisher Scientific |
cat #62249 |
PlasmoTest mycoplasma detection kit |
InvivoGen |
Cat #rep-pt1 |
Lipofectamine RNAiMAX Transfection Reagent |
Thermo Fisher Scientific |
cat #13778030 |
QUANTI-Blue |
InvivoGen |
cat # rep-qbs |
QUANTI-Luc |
InvivoGen |
cat #rep-qlc1 |
Cas9 protein |
UC-Berkeley Macrolab |
N/A |
SF Nucleofector solution |
Lonza |
cat #V4XC-2012 |
GFP-Trap agarose |
ChromoTek |
cat #gta-100 |
Opti-Mem medium |
Fisher Scientific |
cat #31985070 |
DMEM |
Fisher Scientific |
cat #MT15013CV |
RPMI 1640 |
Fisher Scientific |
cat #11875093 |
0.1% Gelatin solution |
Millipore |
cat #ES-006-B |
Amicon Ultra-15 Ultracel-3K centrifugal filters |
Millipore |
cat #UFC500324 |
Human IFN beta ELISA kit |
PBL Assay Sciences |
cat #41100-1 |
Human IFN-b |
EMD Millipore, Millipore Sigma |
cat #IF014 |
NE-PER nuclear and cytoplasmic extraction reagent |
Thermo Fisher Scientific |
cat #78833 |
EcoRI-HF |
New England BioLabs |
cat #R3101S |
SbfI-HF |
New England BioLabs |
cat # R3642S |
NotI-HF |
New England BioLabs |
cat #R3189S |
Pierce Protease Inhibitor Mini Tablets, EDTA-free |
Thermo Fisher Scientific |
cat #A32955 |
Experimental models: Cell lines |
|
|
CHME3 |
Dr. Marc Tardieu (Universite Paris Sud, France) |
N/A |
Human: Normal Human Dermal Fibroblasts (NHDFs) |
Lonza |
cat #CC-2509 |
African green monkey: BSC-40 |
Dr. Ian Mohr (NYU-Lagone, New York, NY, USA) |
N/A |
African green monkey: Vero |
Dr. Ian Mohr (NYU-Lagone, New York, NY, USA) |
N/A |
HEK-293T (293T) |
ATCC |
cat #CLR-3216 |
THP1-Dual cell line |
InvivoGen |
cat #thpd-nfis |
THP1-Dual KO-STING cell line |
InvivoGen |
cat #thpd-kostg |
Oligonucleotides |
|
|
See Table S2 for oligonucleotide information |
|
N/A |
Recombinant DNA |
|
|
pQCXIN |
Clontech |
cat #631514 |
pQCXIN-Flag |
(Malikov et al., 2015) |
N/A |
pQCXIN-FEZ1-Flag |
(Malikov et al., 2015) |
N/A |
pQCXIN-FEZ1-S58A-Flag |
(Malikov et al., 2015) |
N/A |
pQCXIN-eGFP |
This paper |
N/A |
pQCXIN-eGFP-FEZ1 |
This paper |
N/A |
pQCXIN-eGFP-FEZ1-S58A |
This paper |
N/A |
pPM-C-HA-HSPA8 |
Applied Biological Materials |
Cat # BC016179
|
pQCXIN-HSPA8-Flag |
This paper |
N/A |
pQCXIN-eGFP-HSPA8 |
This paper |
N/A |
pCMV-intron |
Dr. Stephen P. Goff (Columbia University, New York, NY, USA) |
N/A |
pVSV-G |
Dr. Stephen P. Goff (Columbia University, New York, NY, USA) |
N/A |
Software and algorithms |
|
|
FIJI (image J installation) |
Open source |
http://fiji.sc RRID:SCR_002285 |
MetaMorph Microscopy Automation and Image Analysis Software |
Molecular Devices |
RRID:SCR_002368 |
GraphPad Prism (Version 7) |
Graphpad |
RRID:SCR_002798 |