Figure 3.

UPGMA phylogenetic tree based on the nucleotide sequence of the prophage and the surrounding genomic context. UPGMA phylogenetic tree based on the nucleotide sequence of the prophage and the hlb genetic environment containing the integration site of the prophage based on reads mapping analysis. dapE, probable succinyl-diaminopimelate desuccinylase; hlb, hemolysin b; xerC, tyrosine recombinase; lexA, LexA repressor; ssbA Staphylococcus aureus, single-stranded DNA-binding protein; clpP, ATP-dependent Clp protease proteolytic subunit; sak, staphylokinase; scn, staphylococcal complement inhibitor; map, Major histocompatibility complex class II analogue protein; lucC, siderophore biosynthesis protein.