Table 3.
Conformational B-cell epitopes from the three-dimensional structure of the human major prion protein
| No. | Score | Residues | Reference | Number of Residues | Location on Structure |
|---|---|---|---|---|---|
| C1 | 0.883 | Q227, R228, G229, S230, S231, M232, V233, L234, F235 | [101] | 9 | Globular domain and unstructured region |
| C2 | 0.811 | N100, K101, P102, S103, K104, P105, K106, T107, N108, M109, K110, H111, M112 | [101] | 13 | Flexible tail |
| C3 | 0.747 | R25, P26, K27, P28, G29, G30, W31, N32, T33, G34, G35, S36, R37, Y38 | [101] | 14 | Flexible tail |
| C4 | 0.717 | P137, I138, I139, H140, F141, G142, S143, D144, Y145, E146, D147, R148, Y149, R151, E152, N153, Y157, V189, T191, T192, T193, K194, G195, E196, N197, F198, T199, E200, T201, D202, V203, K204 | [101] | 32 | Globular domain |
| C5 | 0.708 | R164, E168, Y169, S170, N171, Q172, N173, N174, H177 | [101] | 9 | Globular domain |
| C6 | 0.708 | S222, Q223, A224, Y225 | [101] | 4 | Globular domain |
| C7 | 0.669 | S236, S237, P238, L242, S245, F246, L247, I248, F249, L250, I251, V252, G253 | [101] | 13 | Unstructured region |
| C8 | 0.579 | P39, G40, Q41, G42, S43, P44, G45, G46, N47, R48, Y49 | [101] | 11 | Flexible tail |
| C9 | 0.55 | G55, G56, W57, G58, Q59, P60, H61, G62, G63, G64, W65, G66, Q67, Q75, P76, H77, G78, G79, G80, W81, G82, Q83, P84, H85, G86, W89, G90, Q91, G92, G93, G94, T95, H96, S97, Q98, W99 | [101] | 36 | Octa-repeat & flexible tail |