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. 2022 Mar 8;42(2):161–191. doi: 10.1016/j.cll.2022.02.005

Table 8.

A small selection of SNP PCR assays available in Europe for the detection of SARS-CoV-2 variants of concern

Manufacturer Assay Targets Variant References
EliTech SARS-CoV-2 Variants ELITe MGB® Kit
  • S gene, E484 K

  • S gene, N501Y

Alpha 142
ViaSure (CerTest Biotech) SARS-CoV-2 & UK Variant
  • HV 69/70 s gene deletion

Alpha 143
Anatolia Geneworks/Launch Bosphore SARS-CoV-2 UK. Variant Detection Kit
  • A570D

  • P681H

  • Y144del

Alpha 144
Thermofisher TaqMan Custom SNP Assays
  • Bottom of Form

  • D215 G

  • D614 G

  • HV 69/70 s gene deletion

  • Y144del

  • E484 K

  • E484Q

  • F888 L

  • K417 N

  • K417 T

  • L18 F

  • L452 R

  • N439 K

  • N501Y

  • P681H

  • P681 R

  • S13I

  • S477 N

  • T20 N

  • V1176 F

Alpha
Beta
Gamma
Delta
Plus numerous variants of interest depending on combination used
109
108
TIBMOL BIOL VirSNiP Assays
  • H66D

  • A67 V

  • HV 69/70 s gene deletion

  • D253 G

  • K417 N

  • K417 T

  • L452 R

  • Y453 F

  • T478 K

  • E484 K

  • E484Q

  • N501Y

  • A570D

  • P681H

  • P681 R

  • F888 L

  • Q949 R

  • V1176 F

Alpha
Beta
Gamma
Delta
Plus numerous variants of interest depending on combination used
145
Agena Bioscience MassARRAY SARS-CoV-2 Variant Panel
  • L452 R

  • E484Q

  • P681 R

  • T478 K

  • T19 R

  • P681H

  • N501Y

  • A570D

  • HV 69/70 s gene deletion

  • S982 A

  • T716I

  • Y144del

  • D80 A

  • D215 G

  • K417 N

  • E484 K

  • A701 V

  • L18 F

  • L242_L244del

  • Q677H

  • D253 G

  • L5F

  • T95I

  • S477 N

  • D80 G

  • S13I

  • W152 C

  • N439 K

  • K1191 N

  • Q493 K

  • I692 V

  • Y453 F

  • N501 T

  • Q677P

15 variants of interest including:
Alpha
Beta
Gamma
Delta
110