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. 2022 Feb 23;12:784130. doi: 10.3389/fcimb.2022.784130

Table 2.

Characteristics of patients hospitalized with coronavirus disease 19 (COVID-19).

Patient Specimens Species Ward Date of hospitalization Date of intubation Sampling date Length of stay in ICU (Days) Hospitalization duration RT-PCR Antimicrobial susceptibility phenotype Outcomes Comorbidities Treatment/duration (days)* Steroid/duration (days)
1. Blood A. baumannii  ICU-1 2020/3/15 NI 2020/3/22 9 10 Pos SAM, COL Died COPD COL/3 MTP/4
2. Sputum K. pneumoniae ICU-1 2020/3/9 NI 2020/3/28 61 64 Pos COL Survived Diabetes, Heart disease COL/10 MTP/6
Bal K. pneumoniae 2020/5/3 2020/5/6 COL
3. TA A. baumannii  ICU-2 2020/3/24 2020/3/25 2020/3/27 7 15 Neg SAM, COL Survived - COL/9 DXM/5
4. TA K. pneumoniae ICU-1 2020/3/11 2020/3/19 2020/3/29 23 22 Pos COL Died – COL/1 DXM/5
5. Sputum A. baumannii  ICU-1 2020/3/15 NI 2020/4/2 22 24 Pos SAM, COL Died Diabetes, Heart disease COL/4 DXM/5, MTP/2
6. TA K. pneumoniae ICU-1 2020/3/14 2020/3/20 2020/4/2 26 27 Neg COL Died – COL/5 MTP/8
7. TA K. pneumoniae ICU-1 2020/3/25 2020/4/3 2020/4/5 38 41 Neg AM, COL Died Heart disease COL/3 DXM/2, MTP/4
8. TA A. baumannii  ICU-1 2020/3/27 2020/3/28 2020/4/5 32 45 Pos SAM, COL Survived – COL/4 DXM/2, MTP/6
9. Sputum K. pneumoniae ICU-1 2020/3/25 NI 2020/4/5 9 12 Pos COL Died - - DXM/5
10. TA A. baumannii  ICU-2 2020/3/18 2020/3/30 2020/4/11 23 25 Pos COL Died – COL/1 DXM/6, MTP/2
11. TA A. baumannii  ICU-1 2020/4/11 2020/4/17 2020/4/20 10 11 Pos COL Died - - MTP/3
12. TA A. baumannii  ICU-1 2020/4/17 2020/4/19 2020/4/22 30 31 Pos COL Died – COL/4 DXM/22
Wound K. pneumoniae 2020/4/25 COL
13. TA A. baumannii  ICU-1 2020/4/17 2020/4/25 2020/4/25 7 8 Neg COL Died - - -
14. TA A. baumannii  ICU-1 2020/3/25 2020/4/3 2020/4/30 35 41 Neg SAM, COL Died Diabetes, Heart disease COL/3 DXM/2, MTP/3
15. Sputum K. pneumoniae ICU-1 2020/5/5 NI 2020/5/10 8 9 Neg COL Died - COL/1 DXM/2
16. Blood E. coli ICU-1 2020/4/30 NI 2020/5/12 11 12 Pos AM, PTZ, CAZ, MEM, COL, Died CKD, COPD, Heart disease CAZ/10, COL/1 –
17. Urine A. baumannii  ICU-1 2020/5/4 NI 2020/5/16 20 22 Neg COL Died - COL/1 DXM/3
18. TA A. baumannii  ICU-1 2020/5/2 2020/5/2 2020/5/17 25 56 Neg COL Survived Hypertension COL/34 DXM/1
19. TA K. pneumoniae ICU-1 2020/3/27 2020/3/27 2020/4/17 30 31 Neg COL Died - - DXM/1
20. TA K. pneumoniae ICU-1 2020/5/14 2020/5/15 2020/5/21 10 11 Pos AM, GM, MEM, COL Died Heart disease MEM/3, COL/1 DXM/5
Blood K. pneumoniae AM, COL
21. Sputum A. baumannii  ICU-1 2020/5/11 NI 2020/5/21 4 10 Pos AM, COL Died Heart disease - MTP/3
K. pneumoniae AM, COL
22. Blood K. pneumoniae ICU-1 2020/5/4 NI 2020/5/23 21 32 Neg AM, COL Died – COL/1 DXM/3
23. TA K. pneumoniae ICU-1 2020/5/21 2020/5/21 2020/5/24 16 17 Neg AM, GM, COL Died CND COL/7 MTP/1
24. Sputum A. baumannii  ICU-1 2020/5/10 NI 2020/5/27 30 31 Pos COL Died – COL/14 DXM/10
K. pneumoniae COL
25. TA A. baumannii  ICU-1 2020/5/11 2020/5/25 2020/5/27 6 16 Pos SAM, COL Died COPD, Heart disease - MTP/4
26. Sputum A. baumannii  ICU-1 2020/5/16 NI 2020/5/27 11 20 Pos SAM, COL Died – COL/5 –
27. TA A. baumannii  ICU-1 2020/5/15 2020/5/20 2020/5/30 16 17 Neg COL Died Hypertension COL/2 -
K. pneumoniae COL
28. Sputum A. baumannii  ICU-1 2020/5/20 NI 2020/6/3 9 17 Neg COL Died Heart disease COL/3 MTP/3
29. TA A. baumannii  ICU-1 2020/5/31 2020/5/31 2020/6/5 6 7 Pos COL Died Hypertension - MTP/4
K. pneumoniae COL
30. TA A. baumannii  ICU-2 2020/5/2 2020/5/2 2020/5/6 21 53 Neg COL Survived CND COL/27 DXM/3
K. pneumoniae COL
31. Sputum A. baumannii  ICU-1 2020/5/30 NI 2020/6/9 10 11 Pos SAM, COL Died Heart disease - MTP/2
32. TA A. baumannii  ICU-1 2020/6/2 2020/6/9 2020/6/11 9 10 Pos SAM, COL Died – – MTP/4
33. Sputum A. baumannii  ICU-1 2020/6/9 NI 2020/6/12 3 4 Neg AM, GM Died - - -
34. Sputum A. baumannii  ICU-1 2020/5/19 NI 2020/6/13 24 25 Pos COL Died CND COL/1 DXM/2, MTP/2
K. pneumoniae COL
35. TA K. pneumoniae ICU-2 2020/6/8 2020/6/14 2020/6/17 12 14 Pos COL Died - COL/4 MTP/5
36. TA P. aeruginosa ICU-2 2020/6/3 2020/6/15 2020/6/19 20 30 Neg AM, GM, PTZ, MEM, COL Died – MEM/12 –
37. Blood S. epidermidis ICU-1 2020/5/2 NI 2020/6/22 20 50 Neg VAN, LEN, TEC Survived CND COL/22, LIN/14 DXM/1
38. Sputum K. pneumoniae ICU-2 2020/6/7 NI 2020/6/24 18 20 Pos – Died – COL/4 MTP/7
39. TA K. pneumoniae ICU-1 2020/6/10 2020/6/15 2020/6/25 14 15 Pos COL Died - - MTP/5
40. Sputum A. baumannii  ICU-1 2020/6/8 NI 2020/6/27 27 28 Neg COL Died MI COL/14 MTP/3
K. pneumoniae COL
41. TA K. pneumoniae ICU-1 2020/6/20 2020/6/28 2020/7/1 11 13 Neg COL Died COPD, MI - DXM/5,
MTP/3
42. Sputum A. baumannii  ICU-1 2020/6/23 NI 2020/7/1 10 11 Neg COL Died Heart disease – –
K. pneumoniae COL
43. Sputum K. pneumoniae ICU-1 2020/6/10 NI 2020/6/25 14 15 Pos COL Died Diabetes - MTP/5
44. Sputum K. pneumoniae ICU-1 2020/6/23 NI 2020/7/5 16 26 Pos COL Survived – COL/10 MTP/5
45. TA A. baumannii  ICU-1 2020/6/17 2020/6/28 2020/7/7 51 53 Pos COL Died CKD COL/18, TIG/12 DXM/22
K. pneumoniae COL
Bal K. pneumoniae 2020/7/27 -
46. TA K. pneumoniae ICU-1 2020/6/13 2020/6/21 2020/6/27 23 28 Neg COL Died – COL/10 DXM/5, MTP/4
47. Sputum A. baumannii  ICU-1 2020/6/18 NI 2020/6/27 13 14 Neg COL Survived - COL/6 DXM/4
K. pneumoniae COL
48. TA A. baumannii  ICU-1 2020/7/11 2020/7/11 2020/7/18 23 24 Neg COL Died – COL/18 –
K. pneumoniae COL
49. Sputum A. baumannii  ICU-2 2020/7/9 NI 2020/7/20 7 11 Pos AM, COL Died CKD, COPD - MTP/7
K. pneumoniae COL
50. TA A. baumannii  ICU-2 2020/7/22 2020/8/5 2020/8/5 13 14 Pos COL Died Heart disease – MTP/3
K. pneumoniae COL
51. TA K. pneumoniae ICU-1 2020/7/30 2020/8/3 2020/8/5 9 10 Pos COL Died CKD COL/6 DXM/3, MTP/3
52. TA A. baumannii  ICU-1 2020/7/28 2020/8/1 2020/8/7 10 12 Pos COL Died Diabetes – MTP/4
K. pneumoniae COL
53. Sputum K. pneumoniae ICU-1 2020/7/17 NI 2020/8/8 25 24 Pos AM, GM, PTZ, SAM, CAZ, LEV, MEM, COL, Died MI MEM/7, LEV/7,
COL/13		 DXM/8
54. TA A. baumannii  ICU-1 2020/7/31 2020/7/31 2020/8/9 30 33 Neg SAM, COL Survived – COL/16 DXM/18
55. TA A. baumannii  ICU-1 2020/7/27 2020/8/4 2020/8/7 20 21 Pos COL Died - COL/7 MTP/4
TA Enterobacter 2020/8/13 PTZ, CAZ
56. TA A. baumannii  ICU-2 2020/8/13 2020/8/18 2020/8/20 6 7 Neg SAM, COL Died – – MTP/2
K. pneumoniae COL
57. Blood K. pneumoniae ICU-1 2020/7/29 NI 2020/8/21 22 23 Pos COL Died - COL/10 MTP/5
58. TA K. pneumoniae ICU-1 2020/8/6 2020/8/18 2020/8/21 13 16 Pos – Died Diabetes, Heart disease COL/2 MTP/8
59. TA K. pneumoniae ICU-2 2020/8/18 2020/8/21 2020/8/24 2 6 Pos - Died - - -
60. TA K. pneumoniae ICU-1 2020/8/19 2020/8/19 2020/8/24 10 22 Neg CIP, LEV, COL Survived – COL/14 DXM/8
61. TA K. pneumoniae ICU-2 2020/8/14 2020/8/16 2020/8/25 16 17 Pos COL Died - COL/4 DXM/2, MTP/4
62. TA K. pneumoniae ICU-1 2020/8/22 2020/8/27 2020/8/27 10 20 Pos COL Survived Diabetes COL/12 DXM/10
63. TA K. pneumoniae ICU-1 2020/8/19 2020/8/19 2020/8/28 13 15 Pos COL Died Diabetes COL/3 MTP/2
64. Sputum K. pneumoniae ICU-1 2020/8/10 NI 2020/8/31 19 22 Pos COL Died Diabetes, Heart disease COL/4 MTP/6
65. TA A. baumannii  ICU-1 2020/7/23 2020/8/27 2020/9/6 20 45 Pos SAM, COL Died Diabetes, CKD COL/14 DXM/15, MTP/4
K. pneumoniae COL 

Bal, Bronchoalveolar lavage; TA, Tracheal Aspirate; ICU, Intensive Care Unit; NI, Not Intubate; Pos, Positive; Neg, Negative; SAM, Ampicillin/sulbactam; COL, Colistin; AM, Amikacin; PTZ, Piperacillin-tazobactam; CAZ, Ceftazidime; MEM, Meropenem; GM, Gentamicin; VAN, Vancomycin; LIN, Linezolid; TEC, Teicoplanin; CIP, Ciprofloxacin; LEV, Levofloxacin; TIG, Tigecycline; CKD, Chronic Kidney disease; COPD, Chronic obstructive pulmonary disease; CND, Chronic neurological disease; MI, Medical immunosuppression; MTP, Methyl-prednisolone; DXM, Dexamethasone.

*In this column, only the antibiotics prescribed after the diagnosis of bacterial infections are listed.