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. 2022 Feb 23;13:823190. doi: 10.3389/fpls.2022.823190

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Copyright © 2022 Choi, Cardoso, de Queiroz, de Lima, Lee, Ruhlman, Jansen and Wojciechowski.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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A maximum-likelihood tree based on a concatenated dataset of 77 plastome coding regions with Gblocks trimming (See Table 1). The figure is separated into five panels with a focus on the major clades. (A) Swartzieae, ADA (Angylocalyceae, Dipterygeae, and Amburaneae), Cladrastis, Andira, Exostyleae, Vataireoid, and Genistoid s.l. clades; (B) Dalbergioid s.l. clade; (C) Baphieae, Hypocalypteae, Mirbelioid, Indigofereae, Millettioid (part 1) clades; (D) Millettioid (part 2) clade and (E) Robinioid clade and inverted repeat-lacking clade (IRLC). Supporting values of three trees are visualized at nodes as rectangles. The rectangles are subdivided into three columns that correspond to Tree 1 (left, WP), Tree 5 (middle, CD_nt_gb), and Tree 11 (right, 26 gene trees). Colors in each column represent support values. Black [bootstrap support value (BS) = 100 or local posterior probability (LPP) = 1], Blue [BS (90–99) or LPP (0.76–0.99)], Orange [BS (80–89) or LPP (0.50–0.75)], Bluish green (BS < 80 or LPP 0.50). Scale indicates number of nucleotide substitutions per site. The colors for clades are not related to their support values. We generally followed the color scheme for early-branching papilionoid clades of Figures 2–5 in Cardoso et al. (2013a).