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High nasopharyngeal abundance of Streptococcus species (top) and Haemophilus species (bottom) in patients with microbiological diagnosis of these pathogens as obtained via culture or urine antigen test. Relative abundances (proportion of total 16s rRNA reads) within each individual microbiota sample are presented as box plot overlaid by a dot plot with a line at the median. P values were calculated using the Kruskal-Wallis test.
