Table 2.
Eleven of 82 differential genes enriched in certain cancer metastasis-related GO processes (regulation of cell adhesion and extracellular matrix organization) based on RNA-Seq.
| Gene names | Expression value -shTspan9#1 | Expression value -shTspan9#2 | Expression value -shNC#1 | Expression value -shNC#2 | Log2 fold change | p-value |
|---|---|---|---|---|---|---|
| PDGFB | 2.026756025 | 1.684725714 | 2.268746532 | 3.530040241 | -4.528380789 | p<0.05 |
| TGFB2 | 0.722634952 | 0.559786978 | 1.872658528 | 0.826405003 | -3.186123662 | p<0.05 |
| ITGA8 | 1.023664948 | 1.196609075 | 1.978711921 | 1.449654294 | -2.254178833 | p<0.05 |
| TEK | 0.722634952 | 0.559786978 | 1.361928673 | 1.35788392 | -2.34444508 | p<0.05 |
| FN1 | 3.546946779 | 3.470766925 | 3.595974438 | 4.341457148 | -1.998509785 | p<0.05 |
| COL7A1 | 3.551294849 | 3.251163207 | 3.958601588 | 4.015726844 | -1.864478412 | p<0.05 |
| LCP1 | 1.826926919 | 1.735878237 | 1.908130846 | 2.513041272 | -1.733824821 | p<0.05 |
| COL5A1 | 3.712021197 | 3.592540008 | 4.045844797 | 4.211975531 | -1.595678527 | p<0.05 |
| CITED2 | 3.19830614 | 3.026160239 | 3.047824772 | 3.759892291 | -1.37840773 | p<0.05 |
| DYSF | 1.938234753 | 1.480605732 | 2.095430327 | 2.24800893 | -1.349043777 | p<0.05 |
| GAS6 | 2.722014088 | 2.60641219 | 2.904711187 | 3.053262573 | -1.051382751 | p<0.05 |
The significance of row given in bold in the table is to highlight the direction of research.