TABLE 2.
Copy number variants (CNV) of m5C related regulators in colon adenocarcinoma.
| Function | Genes | Diploid | Deletion | Amplification | CNV sum | Deletion | Amplification | Percentage |
|---|---|---|---|---|---|---|---|---|
| Writers | NOP2 | 379 | 6 | 40 | 46 | 13.04% | 86.96% | 10.82% |
| NSUN2 | 385 | 7 | 33 | 40 | 17.50% | 82.50% | 9.41% | |
| NSUN3 | 406 | 5 | 14 | 19 | 26.32% | 73.68% | 4.47% | |
| NSUN4 | 406 | 17 | 2 | 19 | 89.47% | 10.53% | 4.47% | |
| NSUN5 | 321 | 1 | 103 | 104 | 0.96% | 99.04% | 24.47% | |
| NSUN6 | 405 | 9 | 11 | 20 | 45.00% | 55.00% | 4.71% | |
| NSUN7 | 391 | 32 | 2 | 34 | 94.12% | 5.88% | 8.00% | |
| Erasers | TET1 | 405 | 13 | 7 | 20 | 65.00% | 35.00% | 4.71% |
| TET2 | 396 | 26 | 3 | 29 | 89.66% | 10.34% | 6.82% | |
| TET3 | 415 | 2 | 8 | 10 | 20.00% | 80.00% | 2.35% | |
| ALKBH1 | 342 | 78 | 5 | 83 | 93.98% | 6.02% | 19.53% | |
| Readers | ALYREF | 377 | 13 | 35 | 48 | 27.08% | 72.92% | 11.29% |
| YBX1 | 401 | 19 | 5 | 24 | 79.17% | 20.83% | 5.65% |