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. 2022 Feb 24;13:788593. doi: 10.3389/fpls.2022.788593

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Copyright © 2022 Mahmood, Ali, Mirza, Fayyaz, Majeed, Naeem, Aziz, Trethowan, Ogbonnaya, Poland, Quraishi, Hickey, Rasheed and He.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Manhattan plots showing distribution of p-value on –log(10) scale for SNPs associated with an average coefficient of infection (ACI) at Nowshera-2016 (NWS.16) using 90K SNP array (A) and GBS markers (B). The allelic effects of SNPs on chr7B (C), chr6B (D), chr4D (E), and chr6B (F) are shown as boxplots. Each boxplot shows the distribution of the average coefficient of infection (ACI) in a relevant environment for both allelic states of the SNP marker.