Functional assessment of the difference in drug sensitivity. (A) Isolated from hGBM-L0, SCCs and CD133high cells were co-cultured and treated with TMZ. (B) Three days after initiating TMZ treatment, cell death was evaluated by flow cytometry using live/dead dye incorporation assay. Mean +/− SEM. One-way ANOVA. p-values were adjusted for multiplicity using the Bonferroni method. Results indicate distinct TMZ sensitivity between SCCs and CD133high cells. Three days (C) and ten days (D) after TMZ treatment, the ratio SCC/CD133 was compared between the experimental conditions. Results show a significant increase in the ratio, indicating a greater resistance to TMZ of SCCs compared to CD133high cells. Mean +/− SEM. One-way ANOVA. p-values were adjusted for multiplicity using the Bonferroni method. (E) Representative micrographs of co-cultured SCCs and CD133+ cells treated with TMZ. Scale bars, 100 µm. (F) Hierarchical clustering using DEGs between SCCs and CD133high cells. (G) Drug target enrichment score between SCC and CD133high groups. Drug IDs in red are agents specific to SCC. Drug IDs in yellow are specific to CD133high cells. Drug ID: DB06245: Lanoteplase; DB00031: Tenecteplase; DB06157: Istaroxime; DB06550: Bivatuzumab; DB08515: (3AR,6R,6AS)-6-((S)-((S)-CYCLOHEX-2-ENYL) (HYDROXY)METHYL)-6A-METHYL-4-OXO-HEXAHYDRO-2H-FURO[3,2-C]PYRROLE-6-CARBALDEHYDE; DB04141: 2-Hexyloxy-6-Hydroxymethyl-Tetrahydro-Pyran-3,4,5-Triol; DB04799: 6-Hydroxy-5-undecyl-4,7-benzothiazoledione; DB07401: Azoxystrobin; DB07763: (5S)-3-ANILINO-5-(2,4-DIFLUOROPHENYL)-5-METHYL-1,3-OXAZOLIDINE-2,4-DIONE; DB07778: (S)-famoxadone; DB08330: METHYL (2Z)-3-METHOXY-2-{2-[(E)-2-PHENYLVINYL]PHENYL}ACRYLATE; DB08453: 2-Nonyl-4-quinolinol 1-oxide; and DB08690:Ubiquinone Q2.