Table 5.
Differential expression of genes that belong to the E. coli Fur regulon.
Fur- Fe2+ Regulated Operon | RNA (Up/Down) | Protein (Increased/Decreased) |
---|---|---|
ftnA | 4.27 | 2.4 |
fumB | 1.7 | X |
ompF | 0.64 | −1.62 |
sdh CDAB-sucABCD | −1.51_−1.65_−2.00_−2.01_−2.02_−2.01_−2.08_−2.15 | −1.30_−1.12_−1.11_−1.01_−1.80_−1.33_−1.15_−1.41 |
tonB | −3.16 | X |
entS | −4.65 | X |
gdhA | 1.1 | 1.92 |
glnK-amtB | 3.70_3.42 | 4.42_3.94 |
aspC | 0.01 | 1.73 |
cirA | −2.5 | 1.27 |
entCEBAH | −7.21_−6.18_−5.70_−4.07_−3.90 | −1.49_X_X_X_−1.17 |
exbBD | −4.20_−4.18 | −1.60_−1.11 |
exbD | −4.18 | −1.11 |
fecIR | −3.15_−2.58 | X_X |
feoABC | −3.05_−3.13_−2.68 | X_X_X |
fepA -entD | −3.37 _−0.98 | X_X |
fepB | −3.91 | X |
fepDGC | −3.96_−3.37_−4.44 | X_X_X |
fes-ybdZ-entF- fepE | −5.04_−4.96_−3.10 _−1.69 | X_X_X_X |
fhuACDB | −3.84_−2.87_−2.45_−2.01 | X_−1.30_X−X |
fhuE | −3.12 | X |
fhuF | −6.12 | X |
fumC | −1.6 | −1.59 |
hmp | 0.6 | 1.65 |
nac | 3.7 | X |
ndh | 2.21 | 1.32 |
nrdHIEF | −5.89_−4.29_−3.43_−4.20 | X_X_X_−1.41 |
oppABCDF | 3.09_2.98_2.86_2.75_2.71 | 1.60_1.10_1.67_1.93_X |
ryhB | −3.04 | X |
sodA | −5.8 | −2.2 |
sufABC DSE | −2.35_−2.17_−2.15 _−1.81_−1.64_−1.57 | −1.78_−1.09_−1.27_1.09_−1.20_−1.05 |
yjjZ | −2.03 | X |
yqjH | −3.4 | −1.29 |
Log2 fold change values for up- and down-regulated mRNA and abundance ratio value of increased and decreased protein (in red and green, respectively) are indicated.