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. 2022 Mar 10;17(3):e0252632. doi: 10.1371/journal.pone.0252632

Table 4. Food plant taxa identified using DNA metabarcoding with rbcL and ITS2.

Family name Scientific name Database Published previously in the literature No. of fecal samples Detection frequency per 105 fecal samples
July 8–10,
2016 (n = 31)
July 26–28, 2016 (n = 18) August 18–20, 2015 (n = 31) September 13–14, 2018 (n = 17) October 11–12, 2016 (n = 8) Total
(n = 105)
Apiaceae Peucedanum multivittatum rbcL and ITS2 Yes 10 - - - - 10 9.5%
Tilingia ajanensis rbcL and ITS2 Yes 16 4 12 4 - 36 34.3%
Aquifoliaceae Ilex sugerokii var. brevipedunculata
Asparagaceae Maianthemum dilatatum Yes
Asteraceae Asteraceae (Cirsium otayae, Hieracium japonicum, Solidago virgaurea subsp. asiatica) rbcL No - - - - 2 2 1.9%
Anaphalis margaritacea var. margaritacea
Arnica unalaschcensis var. tschonoskyi Yes
Artemisia sinanensis
Cirsium otayae
Hieracium japonicum
Ixeridium dentatum subsp. kimuranum rbcL and ITS2 No 4 1 1 1 1 8 7.6%
Solidago virgaurea subsp. asiatica ITS2 No - - 1 - - 1 1.0%
Taraxacum officinale ITS2 No 1 - - - - 1 1.0%
Betulaceae Alnus hirsuta var. sibirica ITS2 No 1 - - - - 1 1.0%
Betula ermanii rbcL and ITS2 Yes 4 - 2 4 2 12 11.4%
Brassicaceae Cardamine nipponica
Celastraceae Parnassia palustris
Cephaloziaceae Alobiellopsis parvifolia ITS2 No 1 - - - - 1 1.0%
Cornaceae Cornus canadensis rbcL No - - 4 - 2 6 5.7%
Cupressaceae Juniperus communis var. hondoensis rbcL and ITS2 No 1 1 - - - 2 1.9%
Cyperaceae Carex blepharicarpa ITS2 No 3 5 1 - - 9 8.6%
C. brunnescens
C. oxyandra ITS2 No - - 1 - - 1 1.0%
C. pyrenaica var. altior ITS2 No - 1 - - - 1 1.0%
C. nubigena
Eriophorum vaginatum
Diapensiaceae Schizocodon soldanelloides f. alpinus rbcL Yes 1 - 1 - - 2 1.9%
Droseraceae Drosera rotundifolia
Ericaceae Andromeda polifolia rbcL and ITS2 No - 3 - - - 3 2.9%
Arctous alpina Yes
Elliottia bracteata rbcL and ITS2 Yes 1 - 1 - - 2 1.9%
Empetrum nigrum var. japonicum rbcL and ITS2 Yes 15 8 28 14 7 72 68.6%
Epigaea asiatica rbcL No - 1 - - - 1 1.0%
Eubotryoides grayana var. parvifolia
Gaultheria adenothrix rbcL No - - - 3 1 4 3.8%
G. pyroloides rbcL Yes - - 3 - 1 4 3.8%
Kalmia procumbens rbcL and ITS2 Yes 5 16 11 7 6 45 42.9%
Phyllodoce sp. (P. aleutica, P. nipponica) ITS2 Yes 1 - 1 - - 2 1.9%
P. aleutica rbcL Yes 4 - 4 2 4 14 13.3%
P. nipponica rbcL Yes 1 1 1 - - 4 2.9%
Rhododendron brachycarpum
R. tschonoskii subsp. trinerve
Vaccinium sp. (V. shikokianum, V. smallii var. smallii, V. uliginosum var. japonicum) rbcL and ITS2 Yes 3 5 11 5 - 24 22.9%
Vaccinium hirtum ITS2 No - - 1 - - 1 1.0%
V. ovalifolium var. ovalifolium rbcL Yes 28 10 19 8 8 73 69.5%
V. shikokianum Yes
V. smallii var. smallii Yes
V. uliginosum var. japonicum Yes 14 5 6 6 5 36 34.3%
V. vitis-idaea rbcL and ITS2 Yes 2 2 5 3 2 14 13.3%
Fabaceae Astragalus sinicus ITS2 No 1 - - - - 1 1.0%
Gentianaceae Gentiana makinoi
G. nipponica rbcL No - - 1 - - 1 1.0%
G. thunbergii var. minor rbcL and ITS2 No - - 1 - - 1 1.0%
Hypericaceae Hypericum senanense subsp. mutiloides
Juncaceae Juncus filiformis rbcL and ITS2 No - 1 7 - - 8 7.6%
Lentibulariaceae Pinguicula vulgaris var. macroceras
Melanthiaceae Helonias orientalis
Veratrum stamineum var. stamineum
Menyanthaceae Nephrophyllidium crista-galli subsp. japonicum rbcL and ITS2 No 3 7 1 1 - 12 11.4%
Nartheciaceae Aletris foliata rbcL No 1 - - - - 1 1.0%
Narthecium asiaticum rbcL No - - 1 - - 1 1.0%
Orchidaceae Dactylorhiza aristata rbcL No - 1 3 - - 4 3.8%
Platanthera tipuloides subsp. nipponica
Orobanchaceae Pedicularis chamissonis var. japonica
Pedicularis yezoensis rbcL and ITS2 No 2 1 - - - 3 2.9%
Pinaceae Abies mariesii
Pinus pumila rbcL and ITS2 Yes 1 - - - - 1 1.0%
Plantaginaceae Veronica nipponica
Poaceae Bromus sp. (B. inermis, B. pacificus) rbcL No - - 8 - 1 9 8.6%
Calamagrostis longiseta rbcL No - - 1 - - 1 1.0%
Moliniopsis japonica
Sasa kurilensis rbcL No 1 1 13 - - 15 14.3%
Polygonaceae Persicaria weyrichii var. weyrichii rbcL and ITS2 No 1 - - - - 1 1.0%
Rumex alpestris subsp. lapponicus
Polytrichaceae Polytrichum juniperinum ITS2 No 5 3 4 - - 12 11.4%
Ranunculaceae Aconitum hakusanense ITS2 No - - 1 - - 1 1.0%
Anemone narcissiflora subsp. nipponica ITS2 Yes 1 - - - - 1 1.0%
Coptis trifoliolata rbcL No - - 2 - - 2 1.9%
Ranunculus acris subsp. nipponicus Yes
Rosaceae Aruncus dioicus var. kamtschaticus
Potentilla matsumurae rbcL and ITS2 Yes 2 1 1 2 - 6 5.7%
Rubus vernus rbcL No - - - - 1 1 1.0%
Sieversia pentapetala rbcL and ITS2 Yes 17 1 9 2 2 31 29.5%
Sorbus commixta rbcL and ITS2 No - - 13 2 1 16 15.2%
Sapindaceae Acer tschonoskii
Tofieldiaceae Triantha japonica rbcL and ITS2 No - 5 1 - - 6 5.7%
Xanthorrhoeaceae Hemerocallis dumortieri var. esculenta
Total number of food plant taxa 151 84 181 64 46 526

1) Refer to Kobayashi et al., [16], Chiba et al., [17], and Satomi et al., [18].