| Transcription and translation-related genes |
transfer RNAs |
trnM-CAU, trnR-ACG, trnY-GUA, trnG-UCC, trnL-UAG, trnI-GAU, trnW-CCA, trnR-UCU, trnQ-UUG, trnL-UAA, trnS-GGA, trnH-GUG, trnT-GGU, trnT-UGU, trnP-UGG, trnK-UUU, trnN-GUU, trnG-GCC, trnI-CAU, trnD-GUC, trnF-GAA, trnS-GCU, trnS-UGA, trnfM-CAU, trnE-UUC, trnV-GAC, trnA-UGC, trnV-UAC, trnL-CAA, trnC-GCA |
| RNA polymerase |
rpoB, rpoA, rpoC1, rpoC2 |
| ribosomal proteins(SSU) |
rps8, rps4, rps16, rps14, rps7, rps12, rps2, rps11, rps19-fragment, rps19, rps18, rps3, rps15 |
| ribosomal proteins(LSU) |
rpl2, rpl23, rpl32, rpl33, rpl36, rpl14, rpl16, rpl22, rpl20 |
| Translational initiation factor |
infA |
| ribosomal RNAs |
rrn4.5, rrn5, rrn23, rrn16 |
| Photosynthesis-related genes |
NADH dehydrogenase |
ndhA, ndhH, ndhF, ndhJ, ndhE, ndhI, ndhG, ndhK, ndhC, ndhD, ndhB |
| photosystem I |
psaI, psaJ, psaC, psaB, psaA |
| photosystem II |
psbA, psbL, psbF, psbB, psbK, psbJ, psbM, psbT, psbE, psbD, psbC, psbH, psbI, psbN, psbZ |
| cytochrome b/f complex |
petL, petN, petB, petG, petA, petD |
| RubisCO |
rbcL |
| ATP synthase |
atpA, atpE, atpH, atpI, atpB, atpF |
|
hypothetical chloroplast reading frames(ycf) |
ycf2, ycf4, ycf1, ycf3, ycf1-fragment |
| Other genes |
Maturase |
matK |
| Protease |
clpP |
| Envelope membrane protein |
cemA |
| Subunit of Acetyl-CoA carboxylase |
accD |
| C-type cytochrome synthesis gene |
ccsA |
