Table 1.
Sequences and polymorphism information of the 21 SCoT primers.
| Primer Code | Primer Sequence (5’-3’) | Working Annealing Temperature (°C) | No. of Amplified Loci | No. of Polymorphic Loci | Polymorphic Loci (%) |
|---|---|---|---|---|---|
| SCoT1 | CAACAATGGCTACCACCA | 50 | 13 | 10 | 77.00 |
| SCoT2 | CAACAATGGCTACCACCC | 52 | 12 | 12 | 100.00 |
| SCoT3 | CAACAATGGCTACCACCG | 52 | 11 | 11 | 100.00 |
| SCoT4 | CAACAATGGCTACCACCT | 50 | 7 | 6 | 85.70 |
| SCoT5 | CAACAATGGCTACCACGA | 50 | 9 | 8 | 88.90 |
| SCoT11 | AAGCAATGGCTACCACCA | 52 | 8 | 7 | 87.50 |
| SCoT12 | ACGACATGGCGACCAACG | 56 | 7 | 5 | 71.40 |
| SCoT16 | ACCATGGCTACCACCGAC | 54 | 9 | 8 | 88.90 |
| SCoT19 | ACCATGGCTACCACCGGC | 57 | 10 | 8 | 80.00 |
| SCoT20 | ACCATGGCTACCACCGCG | 58 | 10 | 9 | 90.00 |
| SCoT21 | ACGACATGGCGACCCACA | 57 | 7 | 5 | 71.40 |
| SCoT22 | AACCATGGCTACCACCAC | 52 | 6 | 4 | 66.70 |
| SCoT23 | CACCATGGCTACCACCAG | 53 | 5 | 4 | 80.00 |
| SCoT24 | CACCATGGCTACCACCAT | 52 | 9 | 9 | 100.00 |
| SCoT26 | ACCATGGCTACCACCGTC | 54 | 10 | 9 | 90.00 |
| SCoT30 | CCATGGCTACCACCGGCG | 60 | 10 | 10 | 100.00 |
| SCoT32 | CCATGGCTACCACCGCAC | 56 | 10 | 9 | 90.00 |
| SCoT33 | CCATGGCTACCACCGCAG | 56 | 7 | 6 | 85.70 |
| SCoT34 | ACCATGGCTACCACCGCA | 56 | 7 | 5 | 71.40 |
| SCoT35 | CATGGCTACCACCGGCCC | 58 | 12 | 12 | 100.00 |
| SCoT36 | GCAACAATGGCTACCACC | 52 | 8 | 6 | 75.00 |
| Average | - | - | 8.90 | 7.76 | 85.70 |
| Total | - | - | 187 | 163 | - |