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. 2022 Mar 10;13:1246. doi: 10.1038/s41467-022-28803-w

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© The Author(s) 2022

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 3 — a Automated cell type annotations with ScType in the human PBMC dataset when utilizing both positive and negative marker genes (left panel), and only positive marker genes (right panel). b Expression of CCR7 and SELL genes, which are required for lymph node migration, and are therefore not expected to be expressed in the effector T cells (i.e., negative markers).