Figure 1.

Pairwise plot of allele frequency of SNPs that pass all four tests from genotype batches 1–5. The SNPs are considered as passed if they have non-significant p value (Fisher’s p>3.5×10⁻¹⁰) below the multiple testing corrected threshold for the respective test on discordant genotype frequency between batch, departure from Hardy-Weinberg equilibrium, discordance between the positive control replicates and on discordant genotype frequency between male and female. SNP, single-nucleotide polymorphism