| AOP Ontology Burgoon, (2017)
|
Aopo |
http://aopkb.org/aop_ontology#
|
| BioAssay Ontology Abeyruwan et al. (2014)
|
Bao |
http://www.bioassayontology.org/bao#
|
| Chemical Information ontology Hastings et al. (2011)
|
Cheminf |
http://semanticscience.org/resource/CHEMINF_ |
| Dublin Core |
dc |
http://purl.org/dc/elements/1.1
|
| EDAM Ontology Ison et al. (2013)
|
edam |
http://edamontology.org
|
| Friend Of A Friend |
foaf |
http://xmlns.com/foaf/0.1
|
| Logical Observation Identifier Names and Codes McDonald et al. (2003)
|
loinc |
http://purl.bioontology.org/ontology/LNC
|
| Molecular Interactions Millán, (2020)
|
mi |
http://purl.obolibrary.org/obo/MI_ |
| Measurement Method Ontology Smith et al. (2013)
|
mmo |
http://purl.obolibrary.org/obo/MMO_ |
| NCBI Taxonomy Bodenreider, (2004)
|
ncbitaxon |
http://purl.bioontology.org/ontology/NCBITAXON
|
| Pathway Ontology Petri et al. (2014)
|
pw |
http://purl.obolibrary.org/obo/PW_ |
| RDF Schema |
rdfs |
http://www.w3.org/2000/01/rdf-schema# |
| Semantics Science Ontology Dumontier et al. (2014)
|
sio |
http://semanticscience.org/resource
|
| Simple Knowledge Organization System |
skos |
http://www.w3.org/2004/02/skos/core#
|
| Uber Anatomy Ontology Mungall et al. (2012)
|
uberon |
http://purl.obolibrary.org/obo/UBERON_ |
| Databases |
| AOP-Wiki |
aop.events |
http://identifiers.org/aop.events
|
| Comptox Dashboard Williams et al. (2017)
|
assay |
https://comptox.epa.gov/dashboard/assay_endpoints
|
| CAS Common Chemistry |
cas |
https://identifiers.org/cas
|
| Ensembl Yates et al. (2020)
|
ensembl |
http://identifiers.org/ensembl
|
| HUGO Genome Nomenclature Committee Braschi et al. (2019)
|
hgnc |
https://identifiers.org/hgnc
|
| NCBI Gene |
ncbigene |
https://identifiers.org/ncbigene
|
| Uniprot UniProt Consortium (2019)
|
uniprot |
https://identifiers.org/uniprot
|
| KEGG Pathways Kanehisa et al. (2021)
|
kegg.pathway |
https://identifiers.org/kegg.pathway
|
| PharmGKB Pathways Whirl-Carrillo et al. (2021)
|
pharmgkb.pathways |
https://identifiers.org/pharmgkb.pathways
|
| Small Molecule Pathway Database Jewison et al. (2014)
|
smpdb |
https://identifiers.org/smpdb
|
| BioCyc Karp et al. (2019)
|
biocyc |
https://identifiers.org/biocyc
|
| BioCarta Pathways |
biocarta.pathway |
https://identifiers.org/biocarta.pathway
|
| Reactome Jassal et al. (2020)
|
reactome |
https://identifiers.org/reactome
|
| NCI Pathway Interaction Database Schaefer et al. (2009)
|
pid.pathway |
https://identifiers.org/pid.pathway
|
| NetPath Kandasamy et al. (2010)
|
netpath |
http://netpath.org/pathways?path_id=
|
| WikiPathways Martens et al. (2021b)
|
wikipathways |
https://identifiers.org/wikipathways
|
| AOP-DB Chemical-Gene association |
chemicalgeneassociation |
http://example.org/ChemicalGeneAssociation
|
| AOP-DB Protein Interaction |
proteinInteraction |
http://example/proteinInteraction
|
