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. Author manuscript; available in PMC: 2023 Jan 6.
Published in final edited form as: Mol Cell. 2021 Dec 21;82(1):177–189.e4. doi: 10.1016/j.molcel.2021.11.025

KEY RESOURCE TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Chemicals, Peptides, and Recombinant Proteins
Human DNA-PKcs (full-length) This paper Residues 1–4128
Human Ku70/80 This paper Residues 1–609 and 1–732
Human Artemis This paper Residues 1–692
Deposited Data
DNA-PK-Artemis complex, cryoEM (3.0 Å) This paper PDB: 7SGL
EMDB: EMD-25113
FATKIN domain of DNA-PK-Artemis (2.7 Å) This paper EMDB: EMD-25114
DNA-Artemis-Ku-N-heat of DNA-PK-Artemis (2.9 Å) This paper EMDB: EMD-25115
DNA-PK-DNA complex VII, cryoEM (3.3 Å) This paper PDB: 7SU3
EMDB: EMD-25439
DNA-PK-DNA complex VIII, cryoEM (3.6 Å) This paper PDB: 7SUD
EMDB: EMD-25440
DNA-PK-DNA complex VIIa, cryoEM (4.2 Å) This paper EMDB: EMD-25112
DNA-PK-DNA complex VIIb, cryoEM (4.2 Å) This paper EMDB: EMD-25111
DNA-PK-DNA complex VIb, cryoEM (4.4 Å) This paper EMDB: EMD-25110
Original gel scans Mendeley Data http://dx.doi.org/10.17632/t3525wy6gk.1
Experimental Models: Cell Lines
HeLa-S3 cells National Cell Culture Center https://cellculturecompany.com/national-cell-culture-center/
HEK293T cells ATCC CRL-3216
DNA-PKcs deficient V3 cells Katheryn Meek’s lab N/A
Oligonucleotides
See DNA preparation in Table S2 This paper N/A
Recombinant DNA
Ku70 in pLEXm plasmid This paper pWY2799
Ku80 in pLEXm plasmid This paper pWY2802
Artemis in pLEXm plasmid This paper pWY2332
Software and Algorithms
PyMol Schrodinger https://pymol.org/2/
Prism-8 GraphPad Software https://www.graphpad.com/
CCP4 CCP4 http://www.ccp4.ac.uk
PHENIX (Adams et al., 2010) https://www.phenix-online.org
COOT (Emsley, 2010) https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
UCSF Chimera (Pettersen et al., 2004) https://www.cgl.ucsf.edu/chimera/
cryoSPARC (Punjani et al., 2017) https://cryosparc.com/
RELION (Scheres, 2012); (Fernandez-Leiro and Scheres, 2017) https://www2.mrc-lmb.cam.ac.uk/relion
SerialEM (Mastronarde, 2005) https://bio3d.colorado.edu/SerialEM/