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. Author manuscript; available in PMC: 2022 Mar 11.
Published in final edited form as: J Chem Theory Comput. 2010 Nov 9;6(12):3836–3849. doi: 10.1021/ct100481h

Figure 5.

Figure 5.

Ladder-like conformer as observed in a simulation of the GNRA tetraloop with AMBER force fields, unless the χ torsion profile is appropriately modified. Initial geometry is on the left, and “ladder-like” conformer is on the right.